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Database: UniProt/TrEMBL
Entry: A0A0M4QRY1_9PSED
LinkDB: A0A0M4QRY1_9PSED
Original site: A0A0M4QRY1_9PSED 
ID   A0A0M4QRY1_9PSED        Unreviewed;      1142 AA.
AC   A0A0M4QRY1; A0A1Q4KJE1;
DT   09-DEC-2015, integrated into UniProtKB/TrEMBL.
DT   09-DEC-2015, sequence version 1.
DT   20-DEC-2017, entry version 15.
DE   SubName: Full=ATP-dependent DNA ligase {ECO:0000313|EMBL:ALE88890.1};
GN   ORFNames=AOC04_12150 {ECO:0000313|EMBL:ALE88890.1}, BOH73_10115
GN   {ECO:0000313|EMBL:OKA21649.1};
OS   Pseudomonas versuta.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=1788301 {ECO:0000313|EMBL:ALE88890.1, ECO:0000313|Proteomes:UP000062256};
RN   [1] {ECO:0000313|EMBL:ALE88890.1, ECO:0000313|Proteomes:UP000062256}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=L10.10 {ECO:0000313|EMBL:ALE88890.1,
RC   ECO:0000313|Proteomes:UP000062256};
RA   See-Too W.S., Chan K.G.;
RT   "Complete genome of Pseudomonas sp. L10.10.";
RL   Submitted (SEP-2015) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:OKA21649.1, ECO:0000313|Proteomes:UP000186677}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=A4R1.5 {ECO:0000313|EMBL:OKA21649.1,
RC   ECO:0000313|Proteomes:UP000186677};
RA   See-Too W.-S.;
RT   "Draft genome of Pseudomonas versuta A4R1.5.";
RL   Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP012676; ALE88890.1; -; Genomic_DNA.
DR   EMBL; MPJC01000005; OKA21649.1; -; Genomic_DNA.
DR   RefSeq; WP_060693685.1; NZ_MPJD01000033.1.
DR   EnsemblBacteria; ALE88890; ALE88890; AOC04_12150.
DR   KEGG; ppsy:AOC04_12150; -.
DR   PATRIC; fig|882211.4.peg.2550; -.
DR   KO; K01971; -.
DR   Proteomes; UP000062256; Chromosome.
DR   Proteomes; UP000186677; Unassembled WGS sequence.
DR   GO; GO:0005622; C:intracellular; IEA:InterPro.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0004519; F:endonuclease activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd09086; ExoIII-like_AP-endo; 1.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   Gene3D; 3.60.10.10; -; 1.
DR   InterPro; IPR004808; AP_endonuc_1.
DR   InterPro; IPR020847; AP_endonuclease_F1_BS.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR036691; Endo/exonu/phosph_ase_sf.
DR   InterPro; IPR005135; Endo/exonuclease/phosphatase.
DR   InterPro; IPR037493; ExoIII-like.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF03372; Exo_endo_phos; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   SUPFAM; SSF56219; SSF56219; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   TIGRFAMs; TIGR00633; xth; 1.
DR   PROSITE; PS00726; AP_NUCLEASE_F1_1; 1.
DR   PROSITE; PS51435; AP_NUCLEASE_F1_4; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000062256,
KW   ECO:0000313|Proteomes:UP000186677};
KW   Ligase {ECO:0000313|EMBL:ALE88890.1}.
FT   DOMAIN      605    711       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   1142 AA;  127087 MW;  77FA021FB1EAE8E9 CRC64;
     MHKLKIATFN VNGIAARLPN LLQWLAKERP DIVCLQELKA QDHAFPASDL EAAGYGSLHH
     GQASWNGVAI LARDSEPLLI HKGLPGAEDD SQSRYLEAAV HGVVVGCLYL PNGNPQPGPK
     FEYKFKWFEQ LIAHAETLQA SKHPVVLAGD YNVVPTDIDI YNTRSWLKDA LLQPQSRECY
     QRLLAQGWID SVRHLYPEER VYTFWDYFRQ HWQKNSGLRI DHLLLNPVLA PFLKNAGVDA
     WVRGEAHASD HAPTWIEISS RKTRSKRNTK RNAGDSHSTT QPSDTLDEYN RKRDFNATSE
     PSGSAKPHKS APKKAREPAT LQFCIQKHDA TRLHYDFRLE LDGTLKSWAV PKGPSLDPKS
     KRLAVHVEDH PLDYATFEGT IPEGHYGAGD VIVWDRGIWK PLSDPAEAYA KGRLKFELQG
     EKLGGAWNLV KAHIPGKQEQ WFLIKHQDEF ARPESEYDIV NTEPHSVLSE RTIVQKKCSG
     KSADPKPVEK ATAARKKPGH TQLVSARSST LPDSLKPELA TLVDCAPEGD WRYEIKFDGY
     RIMAKVGDGK VQLFTRNGHD WTHKLPRQAE AIASLALESA WLDGEMVVAN AQGVPDFQAL
     QNAFEQGRSG NIVYYLFDLP FLNGMDLREV PLEQRREALS KVLERSEDEV LKFSDDFAET
     PAALLNSACQ MQMEGLIGKR VGSPYVSRRS GDWIKLKCKR RQEFVIVGFT DPKGSRSKFG
     ALLLGLHDAD SGELKYSGKV GTGFNQVTLA TIYAQLTPLE TKKPAVVNPP TGADAKDVHW
     LKPSLLAEVA FAEITQEGSV RHAVFQGLRN DKPAKSITEE RPAETPQIEK KPDRKKPPAA
     AAKGKGGEEA ATRIRLTHPQ RVIDPTSSAT KRDLADYYIG VSEWLLPQLL NRPVALVRAP
     EGIGGELFFQ KNAERLAIPG IEIIGKEETG HPVMLINNIE ALIGAVQMST IELHTWNAVS
     KDLHRPDRFI LDLDPDPALS WKSMVEATQL TLTVLDELGL TSFLKTSGGK GIHIVVPLTP
     KADWDAVKSF SHAVVKHIAN LLPDRFSAVS GPENRVGRIF IDYLRNGLGA TTICAYSART
     REGLPVSVPI FREELKEIKG ANVWNIQNIH QRLGALGVDP WADMPGTKQT ITAQMRKRIG
     LK
//
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