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Database: UniProt/TrEMBL
Entry: A0A0N9UH36_SPHMC
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ID   A0A0N9UH36_SPHMC        Unreviewed;       838 AA.
AC   A0A0N9UH36;
DT   20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT   20-JAN-2016, sequence version 1.
DT   07-JUN-2017, entry version 11.
DE   SubName: Full=ATP-dependent DNA ligase {ECO:0000313|EMBL:ALH82802.1};
GN   ORFNames=AN936_21285 {ECO:0000313|EMBL:ALH82802.1};
OS   Sphingopyxis macrogoltabida (Sphingomonas macrogoltabidus).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingopyxis.
OX   NCBI_TaxID=33050 {ECO:0000313|EMBL:ALH82802.1, ECO:0000313|Proteomes:UP000058074};
RN   [1] {ECO:0000313|EMBL:ALH82802.1, ECO:0000313|Proteomes:UP000058074}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EY-1 {ECO:0000313|EMBL:ALH82802.1,
RC   ECO:0000313|Proteomes:UP000058074};
RX   PubMed=26634754;
RA   Ohtsubo Y., Nagata Y., Numata M., Tsuchikane K., Hosoyama A.,
RA   Yamazoe A., Tsuda M., Fujita N., Kawai F.;
RT   "Complete Genome Sequence of Polypropylene Glycol- and Polyethylene
RT   Glycol-Degrading Sphingopyxis macrogoltabida Strain EY-1.";
RL   Genome Announc. 3:0-0(2015).
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DR   EMBL; CP012700; ALH82802.1; -; Genomic_DNA.
DR   RefSeq; WP_054589788.1; NZ_CP012700.1.
DR   EnsemblBacteria; ALH82802; ALH82802; AN936_21285.
DR   KEGG; smag:AN936_21285; -.
DR   PATRIC; fig|33050.5.peg.4411; -.
DR   KO; K01971; -.
DR   Proteomes; UP000058074; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000058074};
KW   Ligase {ECO:0000313|EMBL:ALH82802.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000058074}.
FT   DOMAIN       37    142       LigD_N. {ECO:0000259|Pfam:PF13298}.
FT   DOMAIN      251    424       DNA_LIGASE_A3. {ECO:0000259|Pfam:
FT                                PF01068}.
FT   DOMAIN      443    535       DNA_ligase_A_C. {ECO:0000259|Pfam:
FT                                PF04679}.
SQ   SEQUENCE   838 AA;  91387 MW;  FEF4EC936168526A CRC64;
     MARADPLARY NAKRDFKLTP EPAGKVEKGA GNRFIVQKHD ATRLHYDFRL EIDGVLKSWA
     VTKGPSADPA DKRLAVRTED HPMSYADFEG VIPKGEYGGG TVMLWDRGTW APIAGKSAKD
     IEKGHLHFTL DGERMKGEWL LVRMKPRPGE KRENWLLRKV DDAFAGGADD LVGRQLTSVL
     TDRTMADIAA DKGGEQSLQG AKGAAFAKKM AAATAHNKQV AKPVAKPKAR GKPPKFRPLQ
     LATLVDAVPG GNGWFHEIKY DGYRAEIAAA GSDVRVFTRN GLDWTDKFAP LVRHIAALDL
     PPCLIDGEIV AYGKDGNPDF SALQAVLKRG HGEQGEDNDL SFFAFDLLEE SGKSLAKLGN
     LERKERLEAL LRHAQPPIAV ADHVIGAGET LYAAMCGAGQ EGIISKRADA AYSGRRSKNW
     VKVKCTRRQE FILVGWNPSS AKGRAFASLL LAQREKGKLV YKGNVGTGFD AATMADLAKK
     FAARERKTAP LDVDATVARK VHWLKPDLVA EIAFAEFTAG GSVRHASFLG LRRDKEAKEV
     TPEKQQPAPE PASDVTISSR DRVIFPEAKA TKGDLADYYA AIAPVMLPHM ARRPISLVRC
     PQGRAKKCFF QKHDSGSFGD HVHHIPIREK DGGHEDYLYV DDADGILACV QMGTIEFHGW
     GSHVDALEKP DRMVFDLDPD EGLAFADVKK AAADIRRQLA DIGLVSFAML SGGKGVHVVV
     PLDPGHDWDA HKDFSKRFAE ALSLAEPDRY VATMSKAKRK GKIFIDYLRN QRGSTAIMPY
     SARAREGAPV AVPVGWDALA DIESAGAWTI KDAAALLERA GSAELKGWGF ASQKLPAL
//
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