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Database: UniProt/TrEMBL
Entry: A0A0U3LYM1_9BURK
LinkDB: A0A0U3LYM1_9BURK
Original site: A0A0U3LYM1_9BURK 
ID   A0A0U3LYM1_9BURK        Unreviewed;       861 AA.
AC   A0A0U3LYM1;
DT   16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT   16-MAR-2016, sequence version 1.
DT   07-JUN-2017, entry version 8.
DE   SubName: Full=ATP-dependent DNA ligase protein {ECO:0000313|EMBL:ALU89743.1};
GN   ORFNames=Hrubri_2562 {ECO:0000313|EMBL:ALU89743.1};
OS   Herbaspirillum rubrisubalbicans M1.
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Oxalobacteraceae; Herbaspirillum.
OX   NCBI_TaxID=1078773 {ECO:0000313|EMBL:ALU89743.1};
RN   [1] {ECO:0000313|EMBL:ALU89743.1, ECO:0000313|Proteomes:UP000069903}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=M1 {ECO:0000313|EMBL:ALU89743.1,
RC   ECO:0000313|Proteomes:UP000069903};
RA   Balsanelli E., Cardoso R.L.A., Cruz L.M., Faoro H., Chubatsu L.S.,
RA   Muller-Santos M., Baura V.A., Huergo L.F., Wassem R., Broughton W.,
RA   Monteiro R.A., Souza E.M., Pedrosa F.O.;
RT   "Herbaspirillum rubrisubalbicans M1 complete genome.";
RL   Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP013737; ALU89743.1; -; Genomic_DNA.
DR   RefSeq; WP_058895708.1; NZ_CP013737.1.
DR   EnsemblBacteria; ALU89743; ALU89743; Hrubri_2562.
DR   KEGG; hrb:Hrubri_2562; -.
DR   KO; K01971; -.
DR   Proteomes; UP000069903; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000069903};
KW   Ligase {ECO:0000313|EMBL:ALU89743.1}.
FT   DOMAIN      313    420       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   861 AA;  95160 MW;  BADE89C8697B24B2 CRC64;
     MSASSLDRYH ARRDFSITPE PSGHGRQTAR SAQGPLQFFI QRHHARRLHY DFRLELDGVL
     KSWAVPKGPS LDPHDKRLAV RVEDHPLDYG SFEGDIPAQQ YGAGHVVLWD RGQWLPHGDP
     QAGLKQGHLG FTLQGDKLQG RWALVRMGKP ERDGKENWLL IKEDDAAAQT GEAAAITELR
     PESVKDRGDL PSAASELAHG VSQADAIEPH PARIPDVMPA QLATLVDQAP QGEDWLCELK
     FDGYRGLCRI EGGQAAIYTR EGLDWSHRWP VLVQALARLP VDQAWIDGEV VALDAAGHIS
     FEALQNLVRG DRQQADGIRL ALYVFDLPYL NGYDLRAVPL TQRKALLREL VPGSDEEGLL
     LYSEHLLGHA DEVLRHACQH GMEGIVVKRA DAPYSGRRDR NWLKLKCEQR QEFVIAGYTD
     PAGQRSGFGA ILVGVYDDQG QLHYAGRVGT GFDERLLGRM LKLFQRLEQD RPAFVDPPTG
     QQRRGVHWLK PELVAEVKFA QWTKSGILRH GSFVALREDK PPTSIVRETQ QPVAADAPAA
     EEGTAPSPPS PPSRRPSPAD LSQPVMVAGV KLTHPGKILF PATGLTKLEL ARYYQSVAPW
     ILPELKQRPL SLVRCPDGQA GKCFFQKHSG QGMPEAIDTI QVPEGEGTAQ YMMVNDVAGL
     VATVQMGVLE LHAWGATGRA LDQPDRVVFD LDPAPDVPWA SVVEGAQLVR ALLQEIGLES
     YLKTSGGKGL HVMVPMRPEH DWDVVKDWAH RLAAHLARLL PERFIARMSK AARAGKIFID
     YLRNAPGATT VVAYSVRARD GAPVSVPITW EELEQGVRAD HFKVATMPQR LQSLAHSDPW
     AGFGQPRQRL TKAMLAAFDP V
//
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