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Database: UniProt/TrEMBL
Entry: A0A127VFJ5_9SPHI
LinkDB: A0A127VFJ5_9SPHI
Original site: A0A127VFJ5_9SPHI 
ID   A0A127VFJ5_9SPHI        Unreviewed;       882 AA.
AC   A0A127VFJ5;
DT   11-MAY-2016, integrated into UniProtKB/TrEMBL.
DT   11-MAY-2016, sequence version 1.
DT   07-JUN-2017, entry version 9.
DE   SubName: Full=DNA ligase {ECO:0000313|EMBL:AMQ00094.1};
GN   ORFNames=AY601_3223 {ECO:0000313|EMBL:AMQ00094.1};
OS   Pedobacter cryoconitis.
OC   Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales;
OC   Sphingobacteriaceae; Pedobacter.
OX   NCBI_TaxID=188932 {ECO:0000313|EMBL:AMQ00094.1, ECO:0000313|Proteomes:UP000071561};
RN   [1] {ECO:0000313|EMBL:AMQ00094.1, ECO:0000313|Proteomes:UP000071561}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=PAMC 27485 {ECO:0000313|EMBL:AMQ00094.1,
RC   ECO:0000313|Proteomes:UP000071561};
RA   Lee J., Kim O.-S.;
RT   "Complete genome sequence of Pedobacter cryoconitis PAMC 27485.";
RL   Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP014504; AMQ00094.1; -; Genomic_DNA.
DR   RefSeq; WP_068402816.1; NZ_CP014504.1.
DR   EnsemblBacteria; AMQ00094; AMQ00094; AY601_3223.
DR   KEGG; pcm:AY601_3223; -.
DR   PATRIC; fig|188932.3.peg.3358; -.
DR   KO; K01971; -.
DR   Proteomes; UP000071561; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000071561};
KW   Ligase {ECO:0000313|EMBL:AMQ00094.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000071561}.
FT   DOMAIN      330    455       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   882 AA;  99511 MW;  B7E9D7DA51BA65F7 CRC64;
     MSLTAYKKKR SFAQTPEPKG GKGSGKELRF VIQKHDASHL HYDFRLEMGG VLKSWAVPKG
     PSTDPEVKRL AMMVEDHPYD YKDFEGLIPK GEYGGGTVIV WDEGTYEPDE PVDGTIEDQD
     RNLRHQLHSG KISFTLHGKK LKGSFALVRT HGMGENSWLL IKHKDKYAKS DDILLKDKSV
     ISKKTIEQMA KKPVQVYGKK TIKPKQPDAV KPEAEAVKSK LAEAVKPKQN KIVKTPFYDQ
     VKPMLATLVD EAFDKEGWLY EVKWDGYRAV ALMNKGSVEF KSRNNKSFQE KFYPIYQALL
     EWNVNAIVDG EVVSVDKKGK ASFGDLQNWH SDQNGELLYY VFDILWYDGH DLTVLSLMQR
     KAILAQLIPE NSPVRLSKGF ETSGIEFLAA AKKAGLEGIM AKRKDSLYVA GERTNDWLKI
     KASKRQEVVI GGYTKNAGTS KPFSSLLVGL FEGGKFIYTG KIGTGFSMEM QQELLARFEP
     LLIAEPAFTE KPAYNKANPF RAGLGKAKAF WLKPEMICEV NFAEMTTDGV MRHPSFAGMR
     EDKDAKEVVL EKEADTSAIL AGTDDDLTKL NGMKQLLNPK EETQVKKVNG HSLEFTNLNK
     IFWPVEQFTK RDLINYYEQM SSFILPYMKD RPLSLNRYPN GITGESFYQK DVTGKVPDWV
     KTYLYHAEGD DSDKHFMLGE DKATLLYSAG LGCIEVHPWS STIKKPDYPT WCIIDLDPDK
     NSFQQVIEAA QVTKAVLDDM GVPCYCKTSG STGLHVYIPL GNKYTYEQSK EFARIIVTLV
     NREIPAYTSL ERAVSKRKGK MYLDFLQNRP QATIAAPYSL RPKPGATVSM PLHWDEVKKG
     LEMKDFTISN ALSRVKETGD IFKPVLGKGI DLKKIIKGRQ LK
//
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