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Database: UniProt/TrEMBL
Entry: A0A142NDM3_9PSED
LinkDB: A0A142NDM3_9PSED
Original site: A0A142NDM3_9PSED 
ID   A0A142NDM3_9PSED        Unreviewed;       877 AA.
AC   A0A142NDM3;
DT   08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT   08-JUN-2016, sequence version 1.
DT   05-JUL-2017, entry version 8.
DE   SubName: Full=ATP-dependent DNA ligase {ECO:0000313|EMBL:AMT89502.1};
GN   Name=ligD {ECO:0000313|EMBL:AMT89502.1};
GN   ORFNames=AYO71_18905 {ECO:0000313|EMBL:AMT89502.1};
OS   Pseudomonas koreensis.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=198620 {ECO:0000313|EMBL:AMT89502.1, ECO:0000313|Proteomes:UP000075969};
RN   [1] {ECO:0000313|EMBL:AMT89502.1, ECO:0000313|Proteomes:UP000075969}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=D26 {ECO:0000313|EMBL:AMT89502.1,
RC   ECO:0000313|Proteomes:UP000075969};
RA   Feng G.;
RT   "Complete genome sequence of Pseudomonas koreensis d26.";
RL   Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP014947; AMT89502.1; -; Genomic_DNA.
DR   RefSeq; WP_041480886.1; NZ_CP014947.1.
DR   EnsemblBacteria; AMT89502; AMT89502; AYO71_18905.
DR   GeneID; 32069354; -.
DR   KEGG; pkr:AYO71_18905; -.
DR   KO; K01971; -.
DR   Proteomes; UP000075969; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000075969};
KW   Ligase {ECO:0000313|EMBL:AMT89502.1}.
FT   DOMAIN      319    426       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   877 AA;  96779 MW;  AF063558B7A2CBA0 CRC64;
     MNRNLDDYNR MRDFSATSEP AAIKRSGRKS AKDHALQFCI QKHDASHLHY DFRLELDGAL
     KSWAVPKGPS LDPSVKRLAI HVEDHPLDYA TFEGSIPEGH YGAGDVIVWD RGVWIPLEDP
     HKAYAKGRLK FELQGEKLGG VWNLVRTHMP GKKEQWFLIK HQDNAARPQD DFDVLVAEPD
     SVLSERTIVG KPAAAADKAK PVKKAPAKPR KQASGQLTGA RKAKLPALIK PELATLVDSA
     PEGQWSYEIK FDGYRIMARI DHDEVQLFTR NGHDWTHKLP QQAKALAALG LESAWLDGEM
     VVANEQGVPD FQALQNAFDA GRSGNIVYYL FDVPYLNGVD LRDVPVEERR AALSTILGAQ
     KESSTLRFSE AFEETPDALL NSACQMQMEG LIGKRLGSPY VSRRSGDWIK LKCKHRQEFV
     IVGYTDPKGA RSAFGALLLG LHDADSGELR YAGKVGTGFN ETTLKSILAQ LKPLQTKSAA
     VVNPPSGFEA KGVHWLKPKL LAEVAFAEMT KDGSVRHAVF HGLRDDKPAK DITEERAKPV
     KAAKSEKTEK TEKTEKTKTA EKQPAKKTAA SKKAETAPSQ AGLAGGKVRI THPDRVIDAV
     SGTTKMQLAQ YYASVAEHIL PQLKDRPVAL VRAPDGIAGE LFFQKNAERL AIPGITALDK
     DVTGQPVMMI NNPEALVGAV QMSTVELHTW NATKVDLDKP DRFVLDLDPD PALPWKSMVE
     ATALTLTVLD ELGLKAFLKT SGGKGIHLVV PLTRKHGWDE VKDFSHAIVS HMAKLLPDRI
     SAVSGPKNRV GRIFIDYLRN GLGATTICAY AARAREGMPV SVPLYREEVA EIKGGNHWNI
     YNVHERLTEV GDEPWAEMKK TRQTITAEMR KRVGMKK
//
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