GenomeNet

Database: UniProt/TrEMBL
Entry: A0A1B3C6M5_9PSED
LinkDB: A0A1B3C6M5_9PSED
Original site: A0A1B3C6M5_9PSED 
ID   A0A1B3C6M5_9PSED        Unreviewed;       865 AA.
AC   A0A1B3C6M5;
DT   02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT   02-NOV-2016, sequence version 1.
DT   27-SEP-2017, entry version 6.
DE   SubName: Full=ATP-dependent DNA ligase {ECO:0000313|EMBL:AOE60694.1};
GN   Name=ligD {ECO:0000313|EMBL:AOE60694.1};
GN   ORFNames=AXG94_02520 {ECO:0000313|EMBL:AOE60694.1};
OS   Pseudomonas corrugata.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=47879 {ECO:0000313|EMBL:AOE60694.1, ECO:0000313|Proteomes:UP000095006};
RN   [1] {ECO:0000313|EMBL:AOE60694.1, ECO:0000313|Proteomes:UP000095006}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=RM1-1-4 {ECO:0000313|EMBL:AOE60694.1,
RC   ECO:0000313|Proteomes:UP000095006};
RA   Zachow C., Mueller H., Laireiter C., Tilcher R., Berg G.;
RT   "Complete Genome Sequence of Pseudomonas corrugata strain RM1-1-4, a
RT   Stress Protecting Agent from the Rhizosphere of Moss Community treated
RT   Oilseed Rape Seeds.";
RL   Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP014262; AOE60694.1; -; Genomic_DNA.
DR   RefSeq; WP_055136074.1; NZ_LIGO01000207.1.
DR   EnsemblBacteria; AOE60694; AOE60694; AXG94_02520.
DR   KEGG; pcg:AXG94_02520; -.
DR   KO; K01971; -.
DR   Proteomes; UP000095006; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000095006};
KW   Ligase {ECO:0000313|EMBL:AOE60694.1}.
FT   DOMAIN      324    430       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   865 AA;  95512 MW;  CEAE5C3B41043289 CRC64;
     MTSKNLDEYN RMRDFAATPE PAAKRTRKSK KTAHALQFCI QKHDASRLHY DFRLELDGAL
     KSWAVPKGPS LDPKSKRLAV HVEDHPLDYA TFEGSIPEGH YGAGDVIVWD RGMWIPQGDP
     HEAYEKGRLK FELQGEKLAG LWNLVRTHMP GKQEQWFLIK HQDDAARPES EYDVVQAEPE
     SVLSDRTIAP KRRGKAAAAK AVKQPDKAAK PKSSKKIAKT TLSGAVAVPI PETLKPELAT
     LVESAPDGEW LYEIKFDGYR VMARIENGDV RLITRNGHDW THKLPSQAEA LAGLGLESAW
     LDGEMVVVNE QGVPDFQALQ NAFDAGSSGK IAYYLFDLPY LNGMDLRKVP VEQRRAALAA
     VLEGSESPLL RFSDAFEETP EALLNSACRM QMEGLIGKRA GSAYVSRRSS DWIKLKCKNR
     QEFVVVGFSD PKGARSAFGA LLLGLHDADS GELCYAGKVG TGFNETTLKN IHQQLLPLET
     KQAAVVNPPT GYEAKGVHWL KPTLLAEVAY AEMTKEGSVR HAVFHGLRSD KPAREITQER
     PKTLDKPAQA GKKPVKSATK TKGTQIPAMD GKVRITHPDR VIDATSGTTK LQLAEYYAGV
     AEFILPELYE RPVALVRAPD GIAGELFFQK NPERLAIPGI TSLDKALTGQ PVMIINNAEA
     LIGAVQMSTV ELHTWNATTV DLDKPDRFVL DLDPDPALPW KSMVEATQLT LSVLDELGLK
     AFLKTSGGKG IHVVVPLTRK LGWDEVKGFS HAIVSHMAKL LPDRFSAVSG PKNRVGRIFI
     DYLRNGLGAT TICAYAVRTR EGLPVSVPIF RDEVAELKGA NLWNVHNVHE RLAEVGHEPW
     ADLKKTRQSI TADMRRRIGM KKTDK
//
DBGET integrated database retrieval system