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Database: UniProt/TrEMBL
Entry: A0A1D8Y6A2_9GAMM
LinkDB: A0A1D8Y6A2_9GAMM
Original site: A0A1D8Y6A2_9GAMM 
ID   A0A1D8Y6A2_9GAMM        Unreviewed;       857 AA.
AC   A0A1D8Y6A2;
DT   15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT   15-FEB-2017, sequence version 1.
DT   07-JUN-2017, entry version 5.
DE   SubName: Full=DNA ligase D {ECO:0000313|EMBL:AOX61091.1};
GN   ORFNames=BIZ42_02135 {ECO:0000313|EMBL:AOX61091.1};
OS   Stenotrophomonas sp. LM091.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
OC   Xanthomonadaceae; Stenotrophomonas.
OX   NCBI_TaxID=1904944 {ECO:0000313|EMBL:AOX61091.1, ECO:0000313|Proteomes:UP000177427};
RN   [1] {ECO:0000313|EMBL:AOX61091.1, ECO:0000313|Proteomes:UP000177427}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LM091 {ECO:0000313|EMBL:AOX61091.1,
RC   ECO:0000313|Proteomes:UP000177427};
RA   Lefeuvre P.;
RT   "Complete genome sequence of a copper-resistant commensal bacteria:
RT   Stenotrophomonas sp. strain LM091.";
RL   Submitted (SEP-2016) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP017483; AOX61091.1; -; Genomic_DNA.
DR   RefSeq; WP_019184257.1; NZ_CP017483.1.
DR   Proteomes; UP000177427; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000177427};
KW   Ligase {ECO:0000313|EMBL:AOX61091.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000177427}.
FT   DOMAIN      317    409       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   857 AA;  94458 MW;  B65DCA48CFB9A129 CRC64;
     MSLTEYRRKR SFDKTKEPEP GKGLPQGQRA IFVVQLHHAS RRHYDFRLQV GDALKSWAVP
     KGPSYDPKVK RMAVEVEDHP VDYAGFEGDI PKGQYGGGHV AQFDHGVWAT SGDPEAQLAK
     GHLRFELFGT KLKGGWHLVR SGKPAKQPQW LLFKDDDAFA SDVEADDLLG DVTAPPAEDL
     KRAGAGKADK KKLTAVALLK KPRRIDWAKK ALALTKAKKA KPPEGPFEPQ LAKLGDAPPK
     GDQWVHEIKW DGYRILATIT EGEVRLWSRN ALEWTSKIPE IRDAVATLGL TSGALDGELI
     AGSGTKEDFN LLQATLSGER QGALAYALFD LLHIDGIDIA NAPLSERKQL LQELLKESPD
     HLAYSSHIEG DGESAYQLAG ERHFEGIISK RADRAYHGGR SEDWKKTKQL ASDEFAVVGY
     TSPKGNRAGF GSLLLAKPDQ KHGWLYVGRV GSGFSDELIN ELSQLIGRAG GKTPTAHVPT
     KDTDLRSAMW FKPRFVVEVF YRGIGGQQLL RQPSLKAVRR DKGVADLADS DSAPPAEKPT
     DAAQLKPSRK ASKKSSAGEA AKSAGEARTP PKLSSPTKVI FPDIKATKQD VWDYYTAVMD
     HLLPEVIDRP LSVIRCPSGT GKPCFFQKHH TAGLELVDSV RLKEDSGINA HYLVVRDAAS
     LLELVQFNAL EFHPWGSHAE SPDRADRVVF DLDPGPEVPF SEVKKAAVDI CRLLEQLELE
     SFLRVSGGKG LHVVVPLNPG CDWDLTKRFA KGFAEALSQS EPTRFLATST KSLRNKRIFV
     DYLRNGRGAT AVASYSLRGR PGAPVAMPIA WSDLAKLTRA DAFTMKDVPE KMKRRRKDPW
     ADINTIQQNL ARWAQDD
//
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