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Database: UniProt/TrEMBL
Entry: A0A1L3LWF6_9RHIZ
LinkDB: A0A1L3LWF6_9RHIZ
Original site: A0A1L3LWF6_9RHIZ 
ID   A0A1L3LWF6_9RHIZ        Unreviewed;       850 AA.
AC   A0A1L3LWF6;
DT   12-APR-2017, integrated into UniProtKB/TrEMBL.
DT   12-APR-2017, sequence version 1.
DT   27-SEP-2017, entry version 5.
DE   SubName: Full=ATP-dependent DNA ligase YkoU {ECO:0000313|EMBL:APG94386.1};
DE            EC=6.5.1.1 {ECO:0000313|EMBL:APG94386.1};
GN   ORFNames=SAMCFNEI73_pC0667 {ECO:0000313|EMBL:APG94386.1};
OS   Sinorhizobium americanum.
OG   Plasmid c {ECO:0000313|Proteomes:UP000182306}.
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX   NCBI_TaxID=194963 {ECO:0000313|EMBL:APG94386.1, ECO:0000313|Proteomes:UP000182306};
RN   [1] {ECO:0000313|EMBL:APG94386.1, ECO:0000313|Proteomes:UP000182306}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CFNEI 73 {ECO:0000313|EMBL:APG94386.1,
RC   ECO:0000313|Proteomes:UP000182306};
RC   PLASMID=Plasmid c {ECO:0000313|Proteomes:UP000182306};
RA   Peralta H., Aguilar-Vera A., Diaz R., Mora Y., Martinez-Batallar G.,
RA   Salazar E., Vargas-Lagunas C., Encarnacion S., Girard L., Mora J.;
RT   "Genomic differences between typical nodule nitrogen-fixing rhizobial
RT   strains and those coming from bean seeds.";
RL   Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP013110; APG94386.1; -; Genomic_DNA.
DR   RefSeq; WP_064253415.1; NZ_LNQC01000053.1.
DR   GeneID; 32143967; -.
DR   KEGG; same:SAMCFNEI73_pC0667; -.
DR   KO; K01971; -.
DR   Proteomes; UP000182306; Plasmid c.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:UniProtKB-EC.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000182306};
KW   Ligase {ECO:0000313|EMBL:APG94386.1};
KW   Plasmid {ECO:0000313|EMBL:APG94386.1}.
FT   DOMAIN      332    457       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   850 AA;  93342 MW;  B39713F790EC275F CRC64;
     MGLETYREKR DFASTPEPKG GKARRSSNSF VVQKHDATRL HYDFRLEMDG VLKSWAVTKG
     PSLVPGEKRL AVHVEDHPLE YGEFEGTIPK GEYGGGTVIL WDRGTWAPIG DARRGYAKGH
     LEFELSGEKL GGRWHLVRMA GKPREKRENW LLIKGDDEAA RSEQDPDILE ERPESVLTGR
     EIKDVAGEEP GWSSKTGRIR KRARGRKAAA PRGQEPEAPS NVPDPAKIKG AKPAPLPDFV
     EPSLATLVAS APAGERWLHE IKFDGYRLQA RIEAGRTKLL TRGGLDWTKR FGKALVSAVQ
     ALPVGTAVID GEVVVETGSG ASDFSGLQAD LSEGRSDRFR FYAFDLLYLD GYDLRALPLI
     ERKELLGQLI SEDEGVIRIS SHFEEEGSLV LRHACRLSLE GIVSKLRDAP YRAGRNKSWL
     KSKCSARQEF VVAGYVPSTT SRKAIGSLVL GVYEGGKLHH VGRVGTGFTA AVAEGLFKRL
     DRLRIPESPF ATRLAAEDAR QVRYVRPELV AEVEFRAWTA DGLLRHASFR GVRDDKPARD
     IVREAPKSAA AAPKAPRRTV KLTHPDRLYW PDEGVTKEGL ADYYADVWRF VGPHIVGRPL
     ALVRCPNGIT GEKFFQKHAW KGLNPNIVLI NDPKEPPDEQ LLSIRDLDGL MGLVQSAVLE
     IHPWGSTVAD WEGPDTIIMD LDPGEDVPFE TVIEAALETA ERLKAAGLVP FVKTSGGKGL
     HVVAPLKPKA EWPAVKAFTK SIADAMASDS PDRFVSTISK SKRRGKILVD YLRNQRGATA
     VAPYSTRARP GAAVSMPLSW DELAPGIGPA YFTVANTPTR LASLHADPWA DFRAAAVPLK
     EAKAGRKKAA
//
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