GenomeNet

Database: UniProt/TrEMBL
Entry: A0A1L5BNB0_9SPHN
LinkDB: A0A1L5BNB0_9SPHN
Original site: A0A1L5BNB0_9SPHN 
ID   A0A1L5BNB0_9SPHN        Unreviewed;       829 AA.
AC   A0A1L5BNB0;
DT   15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT   15-MAR-2017, sequence version 1.
DT   27-SEP-2017, entry version 5.
DE   SubName: Full=ATP-dependent DNA ligase {ECO:0000313|EMBL:APL94420.1};
GN   ORFNames=SIDU_07840 {ECO:0000313|EMBL:APL94420.1};
OS   Sphingobium indicum B90A.
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=861109 {ECO:0000313|EMBL:APL94420.1, ECO:0000313|Proteomes:UP000004550};
RN   [1] {ECO:0000313|EMBL:APL94420.1, ECO:0000313|Proteomes:UP000004550}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=B90A {ECO:0000313|EMBL:APL94420.1,
RC   ECO:0000313|Proteomes:UP000004550};
RX   PubMed=22843598; DOI=10.1128/JB.00901-12;
RA   Anand S., Sangwan N., Lata P., Kaur J., Dua A., Singh A.K., Verma M.,
RA   Kaur J., Khurana J.P., Khurana P., Mathur S., Lal R.;
RT   "Genome Sequence of Sphingobium indicum B90A, a Hexachlorocyclohexane-
RT   Degrading Bacterium.";
RL   J. Bacteriol. 194:4471-4472(2012).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP013070; APL94420.1; -; Genomic_DNA.
DR   RefSeq; WP_007683499.1; NZ_CP013070.1.
DR   KEGG; sinb:SIDU_07840; -.
DR   KO; K01971; -.
DR   Proteomes; UP000004550; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000004550};
KW   Ligase {ECO:0000313|EMBL:APL94420.1}.
FT   DOMAIN      324    449       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   829 AA;  90986 MW;  2F8F901A2D1F5F29 CRC64;
     MADADPLTAY NRKRDFSRTR EPAGRRGRRQ GNGFIVQKHD ATRLHYDFRL EMDGVLKSWA
     VTRGPSIDPA DKRLAVRTED HPLSYATFEG TIPKGEYGGG TVMLWDEGTW EPVPGKSASD
     LEKGHLHFIL HGQRMRGEWL LIRLKPRGRE KRENWLLRKI EDAHAGSADD LIARNLTSIR
     SGRTMAEIAA GAPAISLKGK KGKAFDAAMA QADRAVPAKR RARAGSDRPP PFQPPQLATL
     VDAVPTGNGW MHEIKYDGYR CLVSASGGKV RIFTRSGLDW TDRFAPLAAE IAAMNLPGAL
     IDGEVVALGS DGNPDFSTLQ QLLKGEGKAA LHLFAFDLLQ LDGQDLTAMP NIGRKEKLAA
     LLGEGAAHIH VGDHVVGAGE RLFQAMCGAG QEGIISKRAD APYRGARTKN WLKVKCTRRQ
     EFVIVGWTPS GASGRSIRNL LLGQREGEGL VYAGKVGTGF NAANSAGLVA ALGKRGRKTA
     ALSVPRSESR GAQWVRPDLV AEIAFAEFTA ENIVRHASFL GLREDKAARE VRREEAMPTS
     EAQSSIRISN PDRLIFPEAK ITKGELAEYY ARMGAAMLPW IARRPISLVR CPQGRAKKCF
     FQKHDSGSFG DHVKHVPIRE KEGNEEDYLY IEDSDGLLAC VQMGAIEFHG WGSGVADVER
     PDRMIFDLDP DEGLDFEDVK KAARDIRRAL EDMGLASFAM LSGGKGIHVV VPLTPQAQWP
     EVKDFADRFA RALAAQEPDR FTATMSKAKR KGRIFIDWLR NQRGATAVLP YVVRARELAS
     VAAPVTWEEL DGIESAAHFT VKDAALLLDR ASSRDLRGWG EAHQPLPAH
//
DBGET integrated database retrieval system