ID A0LSA1_ACIC1 Unreviewed; 212 AA.
AC A0LSA1;
DT 12-DEC-2006, integrated into UniProtKB/TrEMBL.
DT 12-DEC-2006, sequence version 1.
DT 01-MAY-2013, entry version 44.
DE RecName: Full=RNA polymerase sigma factor;
GN OrderedLocusNames=Acel_0538;
OS Acidothermus cellulolyticus (strain ATCC 43068 / 11B).
OC Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC Frankineae; Acidothermaceae; Acidothermus.
OX NCBI_TaxID=351607;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43068 / 11B;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA Pitluck S., Zharchuk I., Schmutz J., Larimer F., Land M., Hauser L.,
RA Kyrpides N., Mikhailova N., Berry A.M., Adney W.S., Normand P.,
RA Leu D., Pujic P., Richardson P.;
RT "Complete sequence of Acidothermus cellulolyticus 11B.";
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
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DR EMBL; CP000481; ABK52311.1; -; Genomic_DNA.
DR RefSeq; YP_872297.1; NC_008578.1.
DR ProteinModelPortal; A0LSA1; -.
DR SMR; A0LSA1; 6-81.
DR STRING; 351607.Acel_0538; -.
DR EnsemblBacteria; ABK52311; ABK52311; Acel_0538.
DR GeneID; 4485121; -.
DR KEGG; ace:Acel_0538; -.
DR PATRIC; 20671468; VBIAciCel132453_0580.
DR eggNOG; COG1595; -.
DR HOGENOM; HOG000094755; -.
DR KO; K03088; -.
DR OMA; GRRQLRD; -.
DR BioCyc; ACEL351607:GIXW-551-MONOMER; -.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-dependent transcription, initiation; IEA:InterPro.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR014293; RNA_pol_sigma70_actinobac.
DR InterPro; IPR000838; RNA_pol_sigma70_ECF_CS.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3_r4.
DR InterPro; IPR011991; WHTH_DNA-bd_dom.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma_r2; 1.
DR SUPFAM; SSF88659; Sigma_r3_r4; 1.
DR TIGRFAMs; TIGR02947; SigH_actino; 1.
DR TIGRFAMs; TIGR02937; sigma70-ECF; 1.
DR PROSITE; PS01063; SIGMA70_ECF; 1.
PE 3: Inferred from homology;
KW Complete proteome; DNA-binding; Sigma factor; Transcription;
KW Transcription regulation.
SQ SEQUENCE 212 AA; 23783 MW; 56F9237438EB9C10 CRC64;
MATVEESAEQ RTVRFERDAL PLIDQLYSAA LRMTRNPADA EDLVQETFVK AFAAFDQFEE
GTNLKAWLYR ILTNTYINSY RKKQREPRQT QGGDDLEDWQ LARAAEHTSS GLRSAEAEAL
DHLPDSDVKE ALQALPEEFR LAVYLADVEG FSYKEIAEIM GTPIGTVMSR LHRGRRALRA
ALENYARERG FLRGSPDGAV SDPDAGGEDG VR
//
