ID A1B8W9_PARDP Unreviewed; 314 AA.
AC A1B8W9;
DT 23-JAN-2007, integrated into UniProtKB/TrEMBL.
DT 23-JAN-2007, sequence version 1.
DT 01-MAY-2013, entry version 54.
DE SubName: Full=Deoxyribose-phosphate aldolase;
DE EC=4.1.2.4;
GN OrderedLocusNames=Pden_3897;
OS Paracoccus denitrificans (strain Pd 1222).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC Rhodobacteraceae; Paracoccus.
OX NCBI_TaxID=318586;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Pd 1222;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R.,
RA Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA Lykidis A., Spiro S., Richardson D.J., Moir J.W.B., Ferguson S.J.,
RA van Spanning R.J.M., Richardson P.;
RT "Complete sequence of chromosome 2 of Paracoccus denitrificans
RT PD1222.";
RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Catalyzes a reversible aldol reaction between
CC acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-
CC D-ribose 5-phosphate (By similarity).
CC -!- CATALYTIC ACTIVITY: 2-deoxy-D-ribose 5-phosphate = D-
CC glyceraldehyde 3-phosphate + acetaldehyde.
CC -!- PATHWAY: Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate
CC degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-
CC deoxy-alpha-D-ribose 1-phosphate: step 2/2.
CC -!- SUBCELLULAR LOCATION: Cytoplasm (By similarity).
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DR EMBL; CP000490; ABL71963.1; -; Genomic_DNA.
DR RefSeq; YP_917659.1; NC_008687.1.
DR ProteinModelPortal; A1B8W9; -.
DR STRING; 318586.Pden_3897; -.
DR EnsemblBacteria; ABL71963; ABL71963; Pden_3897.
DR GeneID; 4582448; -.
DR KEGG; pde:Pden_3897; -.
DR PATRIC; 22858942; VBIParDen97112_3826.
DR eggNOG; COG0274; -.
DR HOGENOM; HOG000241644; -.
DR KO; K01619; -.
DR OMA; MVIDRGA; -.
DR ProtClustDB; CLSK864118; -.
DR UniPathway; UPA00002; UER00468.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004139; F:deoxyribose-phosphate aldolase activity; IEA:EC.
DR GO; GO:0009264; P:deoxyribonucleotide catabolic process; IEA:InterPro.
DR GO; GO:0046386; P:deoxyribose phosphate catabolic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 3.20.20.70; -; 1.
DR InterPro; IPR013785; Aldolase_TIM.
DR InterPro; IPR011343; DeoC.
DR InterPro; IPR002915; DeoC/FbaB/lacD_aldolase.
DR PANTHER; PTHR10889; PTHR10889; 1.
DR Pfam; PF01791; DeoC; 1.
DR PIRSF; PIRSF001357; DeoC; 1.
DR TIGRFAMs; TIGR00126; deoC; 1.
PE 3: Inferred from homology;
KW Complete proteome; Cytoplasm; Lyase; Schiff base.
SQ SEQUENCE 314 AA; 34073 MW; 45D167F10548563E CRC64;
MERKNPGTDF RLDWFENIQV NTPAAERRAT SLAARRSLKK EWQAAWLLNA VRCIDLTTLS
GDDTPDRVAR LCAKARQPVD AGQLAALGVE HLTTGAVCVY PTMVAAAKRA LRGTAIPVAS
VATGFPAGLM PLDLRLAEIR YALDQGADEI DIVISRALVL RGEWAALYDE ICEMREACGS
ARMKAILATG ELKTLTNVAR ASHVAMQAGA DFIKTSTGKE PVNATLPVSL VMLRAIRDYR
DQTGFAVGFK PAGGLRTAKD ALNWQVLMAE ELGRDWLRPD LFRIGASSLL ADIERQISHH
VTGRYAGAHR LAAG
//