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Database: UniProt/TrEMBL
Entry: A4FZC6_METM5
LinkDB: A4FZC6_METM5
Original site: A4FZC6_METM5 
ID   A4FZC6_METM5            Unreviewed;       394 AA.
AC   A4FZC6;
DT   17-APR-2007, integrated into UniProtKB/TrEMBL.
DT   17-APR-2007, sequence version 1.
DT   24-JAN-2024, entry version 73.
DE   SubName: Full=ATP dependent DNA ligase {ECO:0000313|EMBL:ABO35560.1};
GN   OrderedLocusNames=MmarC5_1262 {ECO:0000313|EMBL:ABO35560.1};
OS   Methanococcus maripaludis (strain C5 / ATCC BAA-1333).
OC   Archaea; Euryarchaeota; Methanomada group; Methanococci; Methanococcales;
OC   Methanococcaceae; Methanococcus.
OX   NCBI_TaxID=402880 {ECO:0000313|EMBL:ABO35560.1, ECO:0000313|Proteomes:UP000000253};
RN   [1] {ECO:0000313|EMBL:ABO35560.1, ECO:0000313|Proteomes:UP000000253}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=C5 / ATCC BAA-1333 {ECO:0000313|Proteomes:UP000000253};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA   Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C.,
RA   Detter J.C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Mikhailova N., Sieprawska-Lupa M., Whitman W.B., Richardson P.;
RT   "Complete sequence of chromosome of Methanococcus maripaludis C5.";
RL   Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000609; ABO35560.1; -; Genomic_DNA.
DR   RefSeq; WP_011869012.1; NC_009135.1.
DR   AlphaFoldDB; A4FZC6; -.
DR   STRING; 402880.MmarC5_1262; -.
DR   GeneID; 4929261; -.
DR   KEGG; mmq:MmarC5_1262; -.
DR   eggNOG; arCOG04218; Archaea.
DR   HOGENOM; CLU_061502_0_0_2; -.
DR   OMA; EMAGPES; -.
DR   OrthoDB; 14524at2157; -.
DR   Proteomes; UP000000253; Chromosome.
DR   GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR   CDD; cd07894; Adenylation_RNA_ligase; 1.
DR   Gene3D; 3.10.450.740; -; 1.
DR   Gene3D; 3.30.1490.70; -; 1.
DR   Gene3D; 3.30.70.2160; -; 1.
DR   Gene3D; 3.30.470.30; DNA ligase/mRNA capping enzyme; 1.
DR   InterPro; IPR041596; Lig_Pab1020_C.
DR   InterPro; IPR021122; RNA_ligase_dom_REL/Rnl2.
DR   InterPro; IPR001072; RNA_ligase_Pab1020.
DR   NCBIfam; TIGR01209; RNA ligase; 1.
DR   Pfam; PF18330; Lig_C; 1.
DR   Pfam; PF09414; RNA_ligase; 1.
DR   PRINTS; PR01048; Y414FAMILY.
DR   SUPFAM; SSF56091; DNA ligase/mRNA capping enzyme, catalytic domain; 1.
PE   4: Predicted;
KW   Ligase {ECO:0000313|EMBL:ABO35560.1}.
FT   DOMAIN          98..256
FT                   /note="RNA ligase"
FT                   /evidence="ECO:0000259|Pfam:PF09414"
FT   DOMAIN          267..392
FT                   /note="RNA ligase Pab1020 C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF18330"
SQ   SEQUENCE   394 AA;  46556 MW;  7AF2543AB2BF16F0 CRC64;
     MDKMYLSEDI PNFEEFIINA SKRLNIDEDT LENGFKRKLI TKYEYNGKKY LCFKKKLKHI
     ERGTILFLND NLDFIQGYPK IRRAMVLESA VEKYFDNKIA VEEKLDGYNI RIVKFYGEII
     AITRGGKICP FTTKKVKKYM NTKFLDDFPE LMLCGEMVGL NNPYVSHYYP EADKNHENLG
     FYIFDIRNKE TNSAISISEK EKLLDKYDIP YVKPIKIIDS SDFEELWNLL DDLNEKHREG
     VVLKDLKMIK NPIKYTTHNT QCGDLSVAFK YVYDLGIDFM FSRLVREGYQ SFEKCENEEE
     IKKRSHDLGE SILTPMVETI KEISKDGLAK ECFELYFDSE DDFNEFINYL KTMHINFAIE
     TREYIKKDVF KAKICRIYNS TSNKIKSHLE GNLW
//
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