ID A4FZC6_METM5 Unreviewed; 394 AA.
AC A4FZC6;
DT 17-APR-2007, integrated into UniProtKB/TrEMBL.
DT 17-APR-2007, sequence version 1.
DT 24-JAN-2024, entry version 73.
DE SubName: Full=ATP dependent DNA ligase {ECO:0000313|EMBL:ABO35560.1};
GN OrderedLocusNames=MmarC5_1262 {ECO:0000313|EMBL:ABO35560.1};
OS Methanococcus maripaludis (strain C5 / ATCC BAA-1333).
OC Archaea; Euryarchaeota; Methanomada group; Methanococci; Methanococcales;
OC Methanococcaceae; Methanococcus.
OX NCBI_TaxID=402880 {ECO:0000313|EMBL:ABO35560.1, ECO:0000313|Proteomes:UP000000253};
RN [1] {ECO:0000313|EMBL:ABO35560.1, ECO:0000313|Proteomes:UP000000253}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C5 / ATCC BAA-1333 {ECO:0000313|Proteomes:UP000000253};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C.,
RA Detter J.C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA Mikhailova N., Sieprawska-Lupa M., Whitman W.B., Richardson P.;
RT "Complete sequence of chromosome of Methanococcus maripaludis C5.";
RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP000609; ABO35560.1; -; Genomic_DNA.
DR RefSeq; WP_011869012.1; NC_009135.1.
DR AlphaFoldDB; A4FZC6; -.
DR STRING; 402880.MmarC5_1262; -.
DR GeneID; 4929261; -.
DR KEGG; mmq:MmarC5_1262; -.
DR eggNOG; arCOG04218; Archaea.
DR HOGENOM; CLU_061502_0_0_2; -.
DR OMA; EMAGPES; -.
DR OrthoDB; 14524at2157; -.
DR Proteomes; UP000000253; Chromosome.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR CDD; cd07894; Adenylation_RNA_ligase; 1.
DR Gene3D; 3.10.450.740; -; 1.
DR Gene3D; 3.30.1490.70; -; 1.
DR Gene3D; 3.30.70.2160; -; 1.
DR Gene3D; 3.30.470.30; DNA ligase/mRNA capping enzyme; 1.
DR InterPro; IPR041596; Lig_Pab1020_C.
DR InterPro; IPR021122; RNA_ligase_dom_REL/Rnl2.
DR InterPro; IPR001072; RNA_ligase_Pab1020.
DR NCBIfam; TIGR01209; RNA ligase; 1.
DR Pfam; PF18330; Lig_C; 1.
DR Pfam; PF09414; RNA_ligase; 1.
DR PRINTS; PR01048; Y414FAMILY.
DR SUPFAM; SSF56091; DNA ligase/mRNA capping enzyme, catalytic domain; 1.
PE 4: Predicted;
KW Ligase {ECO:0000313|EMBL:ABO35560.1}.
FT DOMAIN 98..256
FT /note="RNA ligase"
FT /evidence="ECO:0000259|Pfam:PF09414"
FT DOMAIN 267..392
FT /note="RNA ligase Pab1020 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF18330"
SQ SEQUENCE 394 AA; 46556 MW; 7AF2543AB2BF16F0 CRC64;
MDKMYLSEDI PNFEEFIINA SKRLNIDEDT LENGFKRKLI TKYEYNGKKY LCFKKKLKHI
ERGTILFLND NLDFIQGYPK IRRAMVLESA VEKYFDNKIA VEEKLDGYNI RIVKFYGEII
AITRGGKICP FTTKKVKKYM NTKFLDDFPE LMLCGEMVGL NNPYVSHYYP EADKNHENLG
FYIFDIRNKE TNSAISISEK EKLLDKYDIP YVKPIKIIDS SDFEELWNLL DDLNEKHREG
VVLKDLKMIK NPIKYTTHNT QCGDLSVAFK YVYDLGIDFM FSRLVREGYQ SFEKCENEEE
IKKRSHDLGE SILTPMVETI KEISKDGLAK ECFELYFDSE DDFNEFINYL KTMHINFAIE
TREYIKKDVF KAKICRIYNS TSNKIKSHLE GNLW
//