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Database: UniProt/TrEMBL
Entry: A4VLE4_PSEU5
LinkDB: A4VLE4_PSEU5
Original site: A4VLE4_PSEU5 
ID   A4VLE4_PSEU5            Unreviewed;       851 AA.
AC   A4VLE4;
DT   29-MAY-2007, integrated into UniProtKB/TrEMBL.
DT   29-MAY-2007, sequence version 1.
DT   28-FEB-2018, entry version 62.
DE   SubName: Full=DNA ligase, ATP-dependent, putative {ECO:0000313|EMBL:ABP79795.1};
GN   OrderedLocusNames=PST_2130 {ECO:0000313|EMBL:ABP79795.1};
OS   Pseudomonas stutzeri (strain A1501).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=379731 {ECO:0000313|EMBL:ABP79795.1, ECO:0000313|Proteomes:UP000000233};
RN   [1] {ECO:0000313|EMBL:ABP79795.1, ECO:0000313|Proteomes:UP000000233}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=A1501 {ECO:0000313|EMBL:ABP79795.1,
RC   ECO:0000313|Proteomes:UP000000233};
RX   PubMed=18495935; DOI=10.1073/pnas.0801093105;
RA   Yan Y., Yang J., Dou Y., Chen M., Ping S., Peng J., Lu W., Zhang W.,
RA   Yao Z., Li H., Liu W., He S., Geng L., Zhang X., Yang F., Yu H.,
RA   Zhan Y., Li D., Lin Z., Wang Y., Elmerich C., Lin M., Jin Q.;
RT   "Nitrogen fixation island and rhizosphere competence traits in the
RT   genome of root-associated Pseudomonas stutzeri A1501.";
RL   Proc. Natl. Acad. Sci. U.S.A. 105:7564-7569(2008).
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DR   EMBL; CP000304; ABP79795.1; -; Genomic_DNA.
DR   RefSeq; WP_011913262.1; NC_009434.1.
DR   STRING; 379731.PST_2130; -.
DR   EnsemblBacteria; ABP79795; ABP79795; PST_2130.
DR   KEGG; psa:PST_2130; -.
DR   eggNOG; ENOG4105DQE; Bacteria.
DR   eggNOG; COG1793; LUCA.
DR   eggNOG; COG3285; LUCA.
DR   HOGENOM; HOG000222509; -.
DR   KO; K01971; -.
DR   OMA; AMMVEDH; -.
DR   OrthoDB; POG091H0AZ9; -.
DR   BioCyc; PSTU379731:G1G6D-2185-MONOMER; -.
DR   Proteomes; UP000000233; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000000233};
KW   Ligase {ECO:0000313|EMBL:ABP79795.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000233}.
FT   DOMAIN      323    415       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   851 AA;  94475 MW;  B7863640D08E647E CRC64;
     MALEDYQRMR DFAATPEPAG KARPKPRKSQ ALQYCIQKHD ATRLHYDFRL ELDGTLKSWA
     IPKGPSLDPG VRRLAVHVED HPLEYATFEG NIPEGHYGAG DVIVWDRGVW TPQGDPQEGY
     RKGKLKFSLE GEKLAGSWNL VRTQMDGKKE QWFLIKSRDE AAREESEYDI VTAEPDSVLS
     DRTLVPRKRG AKARVAETPP APVKAPAKKR TPARRKAKVA LEGAVPAELP ERFKPQLATL
     VDTVPVGDWR YEIKFDGYRM LARIDAGEVR LFTRNGHDWT AKMPQQAAAL AGLGLESGWL
     DGEVVVPNEE GTPDFQALQN AFEAGRSGSI LYYLFDMPYL NGMDLREVAL EQRRAALREV
     LERSDSELLR FSEDFTEQPD SILESACQMK LEGLIGKRAG STYTSRRSSS WVKIKCSNRQ
     EFIIVGYTQP KGTRTGFGAL LLGLHDDKGE LRYAGKVGTG FNHATLQSLH KKLKKLETDK
     SPLAKAPPAA DARGAQWLKP ELMCEVAYAE MTRQGVVRHS VFHGLRTDKP AEAITHERAK
     PVARATPNVA GKADPLGSGR IKISNPERVI DPSSGITKIE LARFYAQIAP WALPQLQNRP
     LALVRAPEGI TGELFFQKHA DKLAIPHITQ LDPALDPKHG ALLVIDSAEA LVGAAQMGTI
     ELHSWNAVAP DLEHPDRFVL DLDPDPALPW KRMLEATQLT QTLLDEIGLA SFLKTSGGKG
     LHIVVPLDPV QDWSEVKSFS QAIARHLATL LPSHFSAVSG PKNRVGRIFI DYLRNSRGAS
     TVAPYSVRAR EGLPVSVPIH RDELADLKGA NLWTVRNLLE RLQELGDDDP WAAIGKTRQR
     LTKKIRDRLN A
//
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