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Database: UniProt/TrEMBL
Entry: A5FEP5_FLAJ1
LinkDB: A5FEP5_FLAJ1
Original site: A5FEP5_FLAJ1 
ID   A5FEP5_FLAJ1            Unreviewed;       855 AA.
AC   A5FEP5;
DT   12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT   12-JUN-2007, sequence version 1.
DT   07-JUN-2017, entry version 56.
DE   SubName: Full=ATP dependent DNA ligase {ECO:0000313|EMBL:ABQ06319.1};
GN   OrderedLocusNames=Fjoh_3303 {ECO:0000313|EMBL:ABQ06319.1};
OS   Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)
OS   (Cytophaga johnsonae).
OC   Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales;
OC   Flavobacteriaceae; Flavobacterium.
OX   NCBI_TaxID=376686 {ECO:0000313|EMBL:ABQ06319.1, ECO:0000313|Proteomes:UP000006694};
RN   [1] {ECO:0000313|EMBL:ABQ06319.1, ECO:0000313|Proteomes:UP000006694}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 17061 / DSM 2064 / UW101
RC   {ECO:0000313|Proteomes:UP000006694};
RX   PubMed=19717629; DOI=10.1128/AEM.01495-09;
RA   McBride M.J., Xie G., Martens E.C., Lapidus A., Henrissat B.,
RA   Rhodes R.G., Goltsman E., Wang W., Xu J., Hunnicutt D.W.,
RA   Staroscik A.M., Hoover T.R., Cheng Y.Q., Stein J.L.;
RT   "Novel features of the polysaccharide-digesting gliding bacterium
RT   Flavobacterium johnsoniae as revealed by genome sequence analysis.";
RL   Appl. Environ. Microbiol. 75:6864-6875(2009).
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DR   EMBL; CP000685; ABQ06319.1; -; Genomic_DNA.
DR   ProteinModelPortal; A5FEP5; -.
DR   STRING; 376686.Fjoh_3303; -.
DR   EnsemblBacteria; ABQ06319; ABQ06319; Fjoh_3303.
DR   KEGG; fjo:Fjoh_3303; -.
DR   eggNOG; ENOG4105DQE; Bacteria.
DR   eggNOG; COG1793; LUCA.
DR   eggNOG; COG3285; LUCA.
DR   HOGENOM; HOG000222509; -.
DR   KO; K01971; -.
DR   OMA; AMMVEDH; -.
DR   OrthoDB; POG091H0AZ9; -.
DR   BioCyc; FJOH376686:GIXN-3347-MONOMER; -.
DR   Proteomes; UP000006694; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0051103; P:DNA ligation involved in DNA repair; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR016059; DNA_ligase_ATP-dep_CS.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS00333; DNA_LIGASE_A2; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000006694};
KW   Ligase {ECO:0000313|EMBL:ABQ06319.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006694}.
FT   DOMAIN      321    445       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   855 AA;  98005 MW;  D5C7FFFDE1D10885 CRC64;
     MPMSLSKYNE KRDFKQTREP KGKVEKSANE LIFVVQKHAA SHLHYDFRLE MNGVLKSWAV
     PKGPSMDPEV KRLAMMVEDH PYSYKDFEGT IPAGNYGAGN VIVWDNGTYT SDEKTASDEK
     QLLADLKKGR LSFVLKGKKL KGEFSLVKLH GKQENAWLLI KKQDKYASES DILEKDKSVI
     SKRSLEELEK KSDKMTAKSE EKETKLKAIK KKPKAKTIKA EFIKPMLANT TEKPFDDEEW
     IFENKYDGYR TIAVVNSDKT ALFSRNKISF DINFKPIADE LKKIDHTVVL DGEIVVENKS
     GRADFQLLQN YLKTGIGNLK YYVFDLLNLD GNEVTELSLL DRKELLKILF NKYSFSNIFY
     SEHTIANGIE QFEKARKNNS EGIIAKKADS SYTAGGRSNN WLKIKISNEE EAIIIGITEP
     KNSRKYFGAI LLGQYNGKNL QYIGKCGTGF TEAVLKELYT KLKPLFTDQS PLQEKVPLRD
     TIQWVKPKLV CQVKYSEWTQ DNNLRHPVYL GLRIDKKAQE VVFNGNDNTK TINHNQEKME
     NLKEHTTEND YDLKIGKTIL HLTNQNKIYF PQDGITKGDI IQYYNEAAPL MLPYLKDRPE
     SMNRFPNGID SPGFYQKDID ADKTPKWLKT KKIFSESNDA DVNYLICNDK ETLLYMANLG
     CIEINPWNST IKNISNPDWL VIDLDPAKED DFKSVIETAL VVKEVMDELQ TECLCKTSGA
     SGLHIYIPLG AQYDYDSIKI LAELIAKEVH TRLPKTTSIE RSIKKRKNKL YIDFLQNRRG
     QTLAAPYSVR PQPGATVSTP LEWNEVNEKL HPSQFTIKNV LQRFEKKGDL WKPVLSKGAN
     IKKIIKKLEE KQLEN
//
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