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Database: UniProt/TrEMBL
Entry: A6UCT1_SINMW
LinkDB: A6UCT1_SINMW
Original site: A6UCT1_SINMW 
ID   A6UCT1_SINMW            Unreviewed;       865 AA.
AC   A6UCT1;
DT   21-AUG-2007, integrated into UniProtKB/TrEMBL.
DT   21-AUG-2007, sequence version 1.
DT   07-JUN-2017, entry version 56.
DE   SubName: Full=DNA ligase D {ECO:0000313|EMBL:ABR61461.1};
GN   OrderedLocusNames=Smed_2631 {ECO:0000313|EMBL:ABR61461.1};
OS   Sinorhizobium medicae (strain WSM419) (Ensifer medicae).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX   NCBI_TaxID=366394 {ECO:0000313|EMBL:ABR61461.1, ECO:0000313|Proteomes:UP000001108};
RN   [1] {ECO:0000313|Proteomes:UP000001108}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=WSM419 {ECO:0000313|Proteomes:UP000001108};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA   Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M.,
RA   Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Mikhailova N., Reeve W.G., Richardson P.;
RT   "Complete sequence of Sinorhizobium medicae WSM419 chromosome.";
RL   Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000738; ABR61461.1; -; Genomic_DNA.
DR   RefSeq; WP_012066850.1; NC_009636.1.
DR   RefSeq; YP_001328296.1; NC_009636.1.
DR   ProteinModelPortal; A6UCT1; -.
DR   STRING; 366394.Smed_2631; -.
DR   EnsemblBacteria; ABR61461; ABR61461; Smed_2631.
DR   GeneID; 5323500; -.
DR   KEGG; smd:Smed_2631; -.
DR   PATRIC; fig|366394.8.peg.5828; -.
DR   eggNOG; ENOG4105DQE; Bacteria.
DR   eggNOG; COG3285; LUCA.
DR   HOGENOM; HOG000222509; -.
DR   KO; K01971; -.
DR   OMA; QEFVICG; -.
DR   OrthoDB; POG091H0AZ9; -.
DR   BioCyc; SMED366394:GJAL-2645-MONOMER; -.
DR   Proteomes; UP000001108; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000001108};
KW   Ligase {ECO:0000313|EMBL:ABR61461.1}.
FT   DOMAIN      328    455       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   865 AA;  95409 MW;  23C03684C3E2D7E1 CRC64;
     MAARNETLTE YNRRRDFTRT KEPKGTVARR SGNRMRFLVQ KHAATRLHYD FRLEWEGVLK
     SWAVTRGPSL NPEDKRLAVR TEDHPLAYGD FEGTIPKGEY GGGTVMLWDT GWWEPEDDPS
     KALRKGKLSF KLHGSRMKGG WALVRMRPRE GEKRENWLLV KETDEIASKD GESLINENIT
     SVVTGRTMEE IAEGRGEKRS RVWHSNKSTA ANLRAGAVAE DGNARKRPTR KPSGKLPTFR
     APQLATLVTQ VPVGDAWLNE AKFDGYRLVC ALGGGTARCY TRNGLDWTEK FPVIAAALAE
     LDCRSALIDG EVVALSEGGS TFSALQKALA TGASTRLYAF DLIELDGKDL SRKPLVERKE
     KLEALLQTLG TTSTIQFSEH VRGNGEHVLA AICKAGQEGI IAKEANAPYR SGRTRSWLKV
     KCTKRQEFVI GGYSLSDKKG RAFASLIVGT FEGGKLIYRG GVGTGFSKKT MEDLAAAFAS
     RKRETSPFDS IPRERMRHSV WLKPDLVAEV DFAEFTAEGH IRHGSFEGLR EDKEAKAVKL
     ETSKPAEVES GTTTKGKSTT KARRTSAAQG DADVLGIRIS HPDRVLFKGQ GITKIDLARY
     YAIVADRMLP FAADHPVSLV RCPQGGERQC FFQKHASDGF PDAIREVPIT ESSGDTEDYM
     YIHDAKGLVA AVQMGTLEFH IWGARTDRLE KPDRLVFDLD PDPSVDFATV KAAAVELRDE
     LAGIGLKTVP MVTGGKGVHV IVPLRPHAEW DEVKGFAKAL AQSFAERDPD HFVATMSKAK
     RKGRIFIDWL RNDRGATAIA PYSTRARAGG PVATPVGWEE LESLDAANGF HIPEILARIE
     AGTDPWRDIG KISQSLTKKI LNSVA
//
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