ID A6WV97_OCHA4 Unreviewed; 513 AA.
AC A6WV97;
DT 21-AUG-2007, integrated into UniProtKB/TrEMBL.
DT 21-AUG-2007, sequence version 1.
DT 01-MAY-2013, entry version 40.
DE RecName: Full=RNA polymerase sigma-54 factor;
GN OrderedLocusNames=Oant_0170;
OS Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC Brucellaceae; Ochrobactrum.
OX NCBI_TaxID=439375;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49188 / DSM 6882 / NCTC 12168;
RX PubMed=21685287; DOI=10.1128/JB.05335-11;
RA Chain P.S., Lang D.M., Comerci D.J., Malfatti S.A., Vergez L.M.,
RA Shin M., Ugalde R.A., Garcia E., Tolmasky M.E.;
RT "Genome of Ochrobactrum anthropi ATCC 49188 T, a versatile
RT opportunistic pathogen and symbiont of several eukaryotic hosts.";
RL J. Bacteriol. 193:4274-4275(2011).
CC -!- FUNCTION: Sigma factors are initiation factors that promote the
CC attachment of RNA polymerase to specific initiation sites and are
CC then released (By similarity).
CC -!- SIMILARITY: Belongs to the sigma-54 factor family.
CC -----------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution-NoDerivs License
CC -----------------------------------------------------------------------
DR EMBL; CP000758; ABS12901.1; -; Genomic_DNA.
DR RefSeq; YP_001368730.1; NC_009667.1.
DR ProteinModelPortal; A6WV97; -.
DR STRING; 439375.Oant_0170; -.
DR EnsemblBacteria; ABS12901; ABS12901; Oant_0170.
DR GeneID; 5380788; -.
DR KEGG; oan:Oant_0170; -.
DR PATRIC; 20465305; VBIOchAnt73124_0181.
DR eggNOG; COG1508; -.
DR HOGENOM; HOG000071904; -.
DR KO; K03092; -.
DR OMA; RFDPAMQ; -.
DR ProtClustDB; PRK05932; -.
DR BioCyc; OANT439375:GJIT-172-MONOMER; -.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-dependent transcription, initiation; IEA:InterPro.
DR InterPro; IPR000394; RNA_pol_sigma_54.
DR InterPro; IPR007046; RNA_pol_sigma_54_core-bd.
DR InterPro; IPR007634; RNA_pol_sigma_54_DNA-bd.
DR Pfam; PF00309; Sigma54_AID; 1.
DR Pfam; PF04963; Sigma54_CBD; 1.
DR Pfam; PF04552; Sigma54_DBD; 1.
DR PIRSF; PIRSF000774; RpoN; 1.
DR PRINTS; PR00045; SIGMA54FCT.
DR TIGRFAMs; TIGR02395; rpoN_sigma; 1.
DR PROSITE; PS00717; SIGMA54_1; 1.
DR PROSITE; PS00718; SIGMA54_2; 1.
DR PROSITE; PS50044; SIGMA54_3; 1.
PE 3: Inferred from homology;
KW Complete proteome; DNA-binding; DNA-directed RNA polymerase;
KW Nucleotidyltransferase; Sigma factor; Transcription;
KW Transcription regulation; Transferase.
SQ SEQUENCE 513 AA; 56589 MW; BD27CDD2AB6149DD CRC64;
MALSPKLDFR QSQSLVMTPQ LMQSIKLLQM THMELEQFLD IEIEKNPLLD RIEAANDDFS
GAESARDGAE TGGEDAASDD LSDGDWFKTG ASDNAENLSS TFDSSLENIF PDDPGRFDEI
GPDLAAQWKS SVGDGYVSGG SYDIDQVTAS RISLSEHVAE QITLTFSKAA DRFIATALAD
ALDESGYLRV DIVGLAQNLG VETVEIEHVL GVMQDFDPAG LFARDLRECL AIQLRLKDRF
DPAMEVLIDN LDLLARRDFA TLKKLCGVDQ ADILDMLTEI RMLDPKPGAL FEISVADAIV
PDALVTPSRD GGWTIELNAA AMPRLIVNNE YYAEVSTSVK AEEKAFLSDC MQTANWLVRS
LDQRARTILK VTQEIVRQQD GFLRHGVTHL KPLNLRTVAD AVGMHESTIS RVTANKFMAT
PRGVFELRYF FTASIASSEG GDAHSSESVR HRIRQMIDAE KSDDVLSDDA IVDALKKDGV
DIARRTVAKY RESMNIASSV QRRREKKARL SAS
//
