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Database: UniProt/TrEMBL
Entry: A7HPI2_PARL1
LinkDB: A7HPI2_PARL1
Original site: A7HPI2_PARL1 
ID   A7HPI2_PARL1            Unreviewed;       515 AA.
AC   A7HPI2;
DT   11-SEP-2007, integrated into UniProtKB/TrEMBL.
DT   11-SEP-2007, sequence version 1.
DT   29-OCT-2014, entry version 40.
DE   RecName: Full=RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774};
GN   OrderedLocusNames=Plav_0192 {ECO:0000313|EMBL:ABS61815.1};
OS   Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Rhodobiaceae; Parvibaculum.
OX   NCBI_TaxID=402881 {ECO:0000313|EMBL:ABS61815.1, ECO:0000313|Proteomes:UP000006377};
RN   [1] {ECO:0000313|Proteomes:UP000006377}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DS-1 / DSM 13023 / NCIMB 13966
RC   {ECO:0000313|Proteomes:UP000006377};
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA   Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D.,
RA   Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L.,
RA   Kyrpides N., Mikhailova N., Richardson P.;
RT   "Complete genome sequence and annotation of Parvibaculum
RT   lavamentivorans DS-1.";
RL   Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Sigma factors are initiation factors that promote the
CC       attachment of RNA polymerase to specific initiation sites and are
CC       then released. {ECO:0000256|PIRNR:PIRNR000774}.
CC   -!- SIMILARITY: Belongs to the sigma-54 factor family.
CC       {ECO:0000256|PIRNR:PIRNR000774}.
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DR   EMBL; CP000774; ABS61815.1; -; Genomic_DNA.
DR   RefSeq; YP_001411472.1; NC_009719.1.
DR   ProteinModelPortal; A7HPI2; -.
DR   STRING; 402881.Plav_0192; -.
DR   EnsemblBacteria; ABS61815; ABS61815; Plav_0192.
DR   GeneID; 5455025; -.
DR   KEGG; pla:Plav_0192; -.
DR   PATRIC; 22861904; VBIParLav90819_0202.
DR   eggNOG; COG1508; -.
DR   HOGENOM; HOG000071904; -.
DR   KO; K03092; -.
DR   OMA; TQKFMHT; -.
DR   OrthoDB; EOG60CWN7; -.
DR   BioCyc; PLAV402881:GHQA-194-MONOMER; -.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   InterPro; IPR000394; RNA_pol_sigma_54.
DR   InterPro; IPR007046; RNA_pol_sigma_54_core-bd.
DR   InterPro; IPR007634; RNA_pol_sigma_54_DNA-bd.
DR   Pfam; PF00309; Sigma54_AID; 1.
DR   Pfam; PF04963; Sigma54_CBD; 1.
DR   Pfam; PF04552; Sigma54_DBD; 1.
DR   PIRSF; PIRSF000774; RpoN; 1.
DR   PRINTS; PR00045; SIGMA54FCT.
DR   TIGRFAMs; TIGR02395; rpoN_sigma; 1.
DR   PROSITE; PS00717; SIGMA54_1; 1.
DR   PROSITE; PS00718; SIGMA54_2; 1.
DR   PROSITE; PS50044; SIGMA54_3; 1.
PE   3: Inferred from homology;
KW   Complete proteome {ECO:0000313|Proteomes:UP000006377};
KW   DNA-binding {ECO:0000256|PIRNR:PIRNR000774};
KW   DNA-directed RNA polymerase {ECO:0000256|PIRNR:PIRNR000774};
KW   Nucleotidyltransferase {ECO:0000256|PIRNR:PIRNR000774};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006377};
KW   Sigma factor {ECO:0000256|PIRNR:PIRNR000774};
KW   Transcription {ECO:0000256|PIRNR:PIRNR000774};
KW   Transcription regulation {ECO:0000256|PIRNR:PIRNR000774};
KW   Transferase {ECO:0000256|PIRNR:PIRNR000774}.
SQ   SEQUENCE   515 AA;  56513 MW;  DD47AE040F077E43 CRC64;
     MALAPRLEMR QGQSLVMTPQ LQQAIKLLQL SNLELADYVE QELERNPLLE ATTSDPSDRT
     GEERAAPETD RETVTTSETS LSLTDDGPLP GRDGDIDTDY DNVYADESRA DMQNDAAAAA
     ADAPGPTGSD WQNMKGGGGN TGDGDYDFAA TLTREATLAE HLTEQMNTAL KTAGDRLIGA
     YLIDQVNETG YMTADLAEVA ERLGTDVEDV EAVLQVLQTF EPTGICARNL KECLALQLAE
     RNRLDPAMQA FLDNLELFAK RDFDTLMKLT GADREDIASM VEDIRTCNPK PGLAFGGEPV
     VPVIPDVFVR SRADGSWMVE VNSETLPRVL VNQQYYSEVS KLSGDPSAKA YLSECLNNAN
     WLVKSLDQRA RTILKVASEI VRQQDAFLVH GIQHLKPLNL KTIAEAISMH ESTVSRVTAN
     KYIATPRGIF EMKYFFTSSI ASSSGGAAHS AEAVRHRIKE LIDVERPDAV LSDDNLVDIL
     KGQGVDIARR TVAKYREALN IPSSVQRRRE KKAYA
//
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