ID   A7HXF1_PARL1            Unreviewed;       845 AA.
AC   A7HXF1;
DT   11-SEP-2007, integrated into UniProtKB/TrEMBL.
DT   11-SEP-2007, sequence version 1.
DT   01-MAY-2013, entry version 31.
DE   SubName: Full=DNA ligase D;
GN   OrderedLocusNames=Plav_2977;
OS   Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Phyllobacteriaceae; Parvibaculum.
OX   NCBI_TaxID=402881;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DS-1 / DSM 13023 / NCIMB 13966;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA   Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D.,
RA   Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L.,
RA   Kyrpides N., Mikhailova N., Richardson P.;
RT   "Complete genome sequence and annotation of Parvibaculum
RT   lavamentivorans DS-1.";
RL   Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000774; ABS64584.1; -; Genomic_DNA.
DR   RefSeq; YP_001414241.1; NC_009719.1.
DR   ProteinModelPortal; A7HXF1; -.
DR   STRING; 402881.Plav_2977; -.
DR   EnsemblBacteria; ABS64584; ABS64584; Plav_2977.
DR   GeneID; 5455910; -.
DR   KEGG; pla:Plav_2977; -.
DR   PATRIC; 22867723; VBIParLav90819_3072.
DR   eggNOG; COG3285; -.
DR   HOGENOM; HOG000222509; -.
DR   KO; K01971; -.
DR   OMA; LVAECEF; -.
DR   BioCyc; PLAV402881:GHQA-3024-MONOMER; -.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0003896; F:DNA primase activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   Gene3D; 2.40.50.140; -; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; DNA_pol_LigD_ligase_dom.
DR   InterPro; IPR002755; DNA_primase_S.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF01896; DNA_primase_S; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; Nucleic_acid_OB; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome; Ligase.
SQ   SEQUENCE   845 AA;  94893 MW;  3C4E3892CFAA0A58 CRC64;
     MSRKSTSSLE TYWAKRHFDE TPEPRGKKAR RKGHRYSIQM HHTRRLHYDL RLELDGVLKS
     WAITKGPSLD PSVKRLAVRT EDHPVDYIAF EGNIPEGHYG AGTVLLWDRG EWQPIGDPHE
     GLKKGKLAFE IHGERLKGRW ALIRFKGERD PKRENWLLIK ERDDVASSSK DPVEEYKTSV
     SSGRGKKEVS DAPDRVWEDG KAKKAKSKRV TSKGPKHPLP GFVEPALATL VDEPPSGDDW
     LFEMKYDGYR ALASVTGEEV RIFTRSGLDW TERYGALGSA FSDLGLDGAL IDGEIVVTDA
     KGRSSFSDLQ RTLKGEKKGR LSFFAFDLLH SEGEDLRKRP LIERKKQLKA LLGAAGKKGP
     VYYTDHVEGE GEMMLEALCT RGFEGVIAKR ADRPYRSGRG KSWLKIKCQH EQEFVIVGWS
     PSERGRAFSS LLLALREDGE LRYAGRVGTG FSEADLNALS KRFASLARRT SPLKGDVPAE
     IRRNVRWLRP ELVAQIGFAE FTHDGAVRQA RYLGLREDKP ASAVTRESAV PVEKIEKMTA
     TDKTSKDADD DAVIEGVRIT HPDRILFPEQ GVTKLALARY MQKAAPLMLP HLANRLLSLV
     RCPQGPQKKC FFQRHAGSSL PEGFKELPVK GSKERQDYLY LTDAKGLVAA AQMGVLELHL
     WGSHIDDVER PDRIVFDLDP DPDLPFDTVI EAARRMRNVL EALELQSYPM LTGGKGVHVV
     APLVRRHEWP VVKAFTRALA ERLEADAPER YVAKMTKSKR TGRIFIDYLR NDRSSTAIAP
     YSPRARKGAP VAWPVTWEEL DEANSGGDVT IETAFAKRRT DPWKGYGSLR QSLKASALRA
     LDVDA
//