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Database: UniProt/TrEMBL
Entry: B1J1A8_PSEPW
LinkDB: B1J1A8_PSEPW
Original site: B1J1A8_PSEPW 
ID   B1J1A8_PSEPW            Unreviewed;       553 AA.
AC   B1J1A8;
DT   29-APR-2008, integrated into UniProtKB/TrEMBL.
DT   29-APR-2008, sequence version 1.
DT   24-JAN-2024, entry version 76.
DE   RecName: Full=DNA ligase (ATP) {ECO:0000256|ARBA:ARBA00012727};
DE            EC=6.5.1.1 {ECO:0000256|ARBA:ARBA00012727};
GN   OrderedLocusNames=PputW619_1134 {ECO:0000313|EMBL:ACA71639.1};
OS   Pseudomonas putida (strain W619).
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=390235 {ECO:0000313|EMBL:ACA71639.1};
RN   [1] {ECO:0000313|EMBL:ACA71639.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=W619 {ECO:0000313|EMBL:ACA71639.1};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S.,
RA   Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L.,
RA   Kyrpides N., Kim E., Taghavi S., Vangronsveld D., van der Lelie D.,
RA   Richardson P.;
RT   "Complete sequence of Psuedomonas putida W619.";
RL   Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + (deoxyribonucleotide)n-3'-hydroxyl + 5'-phospho-
CC         (deoxyribonucleotide)m = (deoxyribonucleotide)n+m + AMP +
CC         diphosphate.; EC=6.5.1.1; Evidence={ECO:0000256|ARBA:ARBA00034003};
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DR   EMBL; CP000949; ACA71639.1; -; Genomic_DNA.
DR   AlphaFoldDB; B1J1A8; -.
DR   STRING; 390235.PputW619_1134; -.
DR   KEGG; ppw:PputW619_1134; -.
DR   eggNOG; COG1793; Bacteria.
DR   HOGENOM; CLU_005138_6_2_6; -.
DR   OMA; WLFEESY; -.
DR   OrthoDB; 9767858at2; -.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:UniProtKB-EC.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR   CDD; cd07897; Adenylation_DNA_ligase_Bac1; 1.
DR   CDD; cd07972; OBF_DNA_ligase_Arch_LigB; 1.
DR   Gene3D; 1.10.3260.10; DNA ligase, ATP-dependent, N-terminal domain; 1.
DR   Gene3D; 3.30.470.30; DNA ligase/mRNA capping enzyme; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   InterPro; IPR026333; ATP_dep_DNA_lig_pp_1105_fam.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR016059; DNA_ligase_ATP-dep_CS.
DR   InterPro; IPR012308; DNA_ligase_ATP-dep_N.
DR   InterPro; IPR036599; DNA_ligase_N_sf.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   NCBIfam; TIGR04120; DNA_lig_bact; 1.
DR   PANTHER; PTHR45674; DNA LIGASE 1/3 FAMILY MEMBER; 1.
DR   PANTHER; PTHR45674:SF13; DNA LIGASE-RELATED; 1.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF04675; DNA_ligase_A_N; 1.
DR   SUPFAM; SSF56091; DNA ligase/mRNA capping enzyme, catalytic domain; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   PROSITE; PS00697; DNA_LIGASE_A1; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   DNA replication {ECO:0000256|ARBA:ARBA00022705};
KW   Ligase {ECO:0000256|ARBA:ARBA00022598, ECO:0000313|EMBL:ACA71639.1};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741}.
FT   DOMAIN          322..454
FT                   /note="ATP-dependent DNA ligase family profile"
FT                   /evidence="ECO:0000259|PROSITE:PS50160"
SQ   SEQUENCE   553 AA;  61980 MW;  08E15B0AB7F5B3C4 CRC64;
     MKAFAQLYLR LDATTSSNGK LQALRDYFAA APAEDAAWAV YFLSGGRPRQ LVPTRVLREL
     ATALAGLPGW LFDESYQAVG DLAETISLLL PENQQGSKSG LAHWVETHLL PLRGLPAEEV
     QQRLPPLWAE LDRPSLMLCL KLITGSFRVG VSKLLVTRAL AQLAGLDAKR IAQRLVGYTD
     ISHRPTANSY HKLIAAESAD EHSQRGGQPY PFFLAHALQA PLEQFDALLG PPSAWQIEWK
     WDGIRAQVVK RDGQVWVWSR GEELVTDRFP ELHGLAQNLP DGVVLDGEIL VWKPDSGNDQ
     ALAVQPFALL QQRIGRKTLG KKLLADAPVV LQAYDLLEWQ GEDWRNHPQH ERRQQLQRLV
     EDYPLAPILL SPLLEGKDWH ALAIQRDRSR SLGVEGLMLK QRDALYGVGR TKDMGVWWKW
     KIDPFSVDAV LIYAQRGHGR RASLYSDYTF AVWNAPPGAP ERALVPFAKA YSGLSDEEMR
     KVDAIIRKTT VETFGPVRSV KPTLVFELGF EGIALSKRHK SGIAVRFPRM LRWRLDKPVE
     EADDLATLQA LLA
//
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