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Database: UniProt/TrEMBL
Entry: B1Z4V9_BURA4
LinkDB: B1Z4V9_BURA4
Original site: B1Z4V9_BURA4 
ID   B1Z4V9_BURA4            Unreviewed;       949 AA.
AC   B1Z4V9;
DT   20-MAY-2008, integrated into UniProtKB/TrEMBL.
DT   20-MAY-2008, sequence version 1.
DT   07-JUN-2017, entry version 55.
DE   SubName: Full=DNA ligase D {ECO:0000313|EMBL:ACB68772.1};
GN   OrderedLocusNames=BamMC406_6340 {ECO:0000313|EMBL:ACB68772.1};
OS   Burkholderia ambifaria (strain MC40-6).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
OX   NCBI_TaxID=398577 {ECO:0000313|EMBL:ACB68772.1, ECO:0000313|Proteomes:UP000001680};
RN   [1] {ECO:0000313|Proteomes:UP000001680}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MC40-6 {ECO:0000313|Proteomes:UP000001680};
RA   Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E.,
RA   Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L.,
RA   Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Lykidis A., Ramette A., Konstantinidis K., Tiedje J., Richardson P.;
RT   "Complete sequence of chromosome 3 of Burkholderia ambifaria MC40-6.";
RL   Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP001027; ACB68772.1; -; Genomic_DNA.
DR   RefSeq; WP_012372656.1; NC_010557.1.
DR   ProteinModelPortal; B1Z4V9; -.
DR   EnsemblBacteria; ACB68772; ACB68772; BamMC406_6340.
DR   KEGG; bac:BamMC406_6340; -.
DR   HOGENOM; HOG000222509; -.
DR   KO; K01971; -.
DR   OMA; AMMVEDH; -.
DR   OrthoDB; POG091H0AZ9; -.
DR   Proteomes; UP000001680; Chromosome 3.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000001680};
KW   Ligase {ECO:0000313|EMBL:ACB68772.1}.
FT   DOMAIN      363    449       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   949 AA;  104991 MW;  290C4B1A9B99DE95 CRC64;
     MAGKLDPYRR KRHFGATPEP EGAHGRRTQA AAKAAARTRA RGAHPLRFVI QEHHARRLHY
     DFRLELDGTL KSWAVPKGPS FDPSVKRLAV HVEDHPLEYA SFEGQIPEGH YGAGSVVVWD
     EGTWTPDGGL AQAREGYRAG KLTFRLDGEK LHGGWALVRS GRQQGRQEQW LLIKERDDDA
     RSMDEFDVVG ERPGSVHDGA ASARADAKNG SARARGSRQG RSEKPATRAA RHDDRAHDGH
     AGAPVDPSRI EGAVRAPLPE HVAPQLATLV DGPPTQGDWC YELKFDGYRI LARISGKGAR
     RHVKLMTREG RDWTAKLRAQ RDALAALDVD AAWLDGEAVV LGKNGLPDFQ ALQNAFGGGH
     SDEITLFVFD LPYLDGYDLR DAPLTARRAL LEPLLADSDP TRLRFSPDLG DDVASLIASA
     CDTGLEGLIG KRAESRYRAG RSPAWIKLKC RRRQEFVIGG YTEPSGSRHG FGALLLGVHE
     PAADGKRRRG PGPLRYVGRV GTGFDTRMLD RLTPILRKHE RDKMPFDPPP RERSRTPVHW
     IEPVLVAECE FAEWTGDGIV RQAAFIALRD DKPAARIVRE VPKHTETEVQ MDQRETAQHE
     RHKPGRTAHA GRDTGDTSDT SDTSDTSDTS DTSDGKHPAR SRGSRRAEAD DTGPDQLGRV
     RISHPERVID SHSGTRKIDL ARYWQWVAPW LLPDLKGRPV SLVRAPGDIS GELFFQKHAE
     RREIPFVTQH DGLDPGHGPL LSLDSVDALL GAAQMGTIEL HTWNAHASNI ERPDRIVFDL
     DPDPALPWSA MIDAAQLVRG LLDELGLISF CKTSGGKGLH VVVPITRHMG WDEVKDFSRA
     VAQHVAGALP DRFTATMGPK HRRGKIFIDY LRNGRGASTI AAYSVRARPG LGVSVPLRWD
     EVPDTTGGAQ WTIDTLHERL DRLKRDPWDG YDDTRQRITA QMRARLGTS
//
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