ID B2T3T4_BURPP Unreviewed; 360 AA.
AC B2T3T4;
DT 01-JUL-2008, integrated into UniProtKB/TrEMBL.
DT 01-JUL-2008, sequence version 1.
DT 01-MAY-2013, entry version 42.
DE RecName: Full=RNA polymerase sigma factor;
GN OrderedLocusNames=Bphyt_1837;
OS Burkholderia phytofirmans (strain DSM 17436 / PsJN).
OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Burkholderia.
OX NCBI_TaxID=398527;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17436 / PsJN;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L.,
RA Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA Mikhailova N., Nowak J., Sessitsch A., Lazarovits G., Compant S.,
RA Barka E., Tiedje J.;
RT "Complete sequence of chromosome 1 of Burkholderia phytofirmans
RT PsJN.";
RL Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Sigma factors are initiation factors that promote the
CC attachment of RNA polymerase to specific initiation sites and are
CC then released (By similarity).
CC -!- SIMILARITY: Belongs to the sigma-70 factor family.
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DR EMBL; CP001052; ACD16245.1; -; Genomic_DNA.
DR RefSeq; YP_001895469.1; NC_010681.1.
DR ProteinModelPortal; B2T3T4; -.
DR SMR; B2T3T4; 85-185.
DR STRING; 398527.Bphyt_1837; -.
DR EnsemblBacteria; ACD16245; ACD16245; Bphyt_1837.
DR GeneID; 6281476; -.
DR KEGG; bpy:Bphyt_1837; -.
DR PATRIC; 19213842; VBIBurPhy117947_5696.
DR eggNOG; COG0568; -.
DR HOGENOM; HOG000270273; -.
DR KO; K03087; -.
DR OMA; CEVITRR; -.
DR ProtClustDB; PRK05657; -.
DR BioCyc; BPHY398527:GJEX-1854-MONOMER; -.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-dependent transcription, initiation; IEA:InterPro.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR009042; RNA_pol_sigma70_r1_2.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007624; RNA_pol_sigma70_r3.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3_r4.
DR InterPro; IPR012761; RNA_pol_sigma_RpoS_proteobac.
DR InterPro; IPR011991; WHTH_DNA-bd_dom.
DR Pfam; PF00140; Sigma70_r1_2; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04539; Sigma70_r3; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR PRINTS; PR00046; SIGMA70FCT.
DR SUPFAM; SSF88946; Sigma_r2; 1.
DR SUPFAM; SSF88659; Sigma_r3_r4; 2.
DR TIGRFAMs; TIGR02394; rpoS_proteo; 1.
DR TIGRFAMs; TIGR02937; sigma70-ECF; 1.
DR PROSITE; PS00715; SIGMA70_1; 1.
DR PROSITE; PS00716; SIGMA70_2; 1.
PE 3: Inferred from homology;
KW Complete proteome; DNA-binding; Sigma factor; Transcription;
KW Transcription regulation.
SQ SEQUENCE 360 AA; 40683 MW; FE2EC0C8B85710D0 CRC64;
MPKSKRRPPQ AESEKTSNAM SASVDESGAS EVEEEIAEER DLDERQGGAD EAGETRESAS
EAAPDADDFR ALLQAELTAD TIQHYLNRIS VKPLLTVEEE QKYSRLAKAG EFEARQVMIE
RNLRLVVSIA KGYLNRGVPL LDLIEEGNLG LMHAIEKFDP TRGFRFSTYA TWWIRQSIER
AIMNQARTVR LPVHVIRELN QVLRAKRHLE KNSMNSGEAA ERRDASIDDI AYLTGKTTDE
VTDILALNEH TASLDAPLDL DPASSLLDLL SDDQSQSPDA EVQHRELETL TRAWLARLSD
KHRHVIERRF GLNHIEPATL EELADEMGLT RERVRQIQQE ALVRLKRFFA SNGVRKDAVL
//
