ID B5FAQ8_VIBFM Unreviewed; 324 AA.
AC B5FAQ8;
DT 14-OCT-2008, integrated into UniProtKB/TrEMBL.
DT 14-OCT-2008, sequence version 1.
DT 01-MAY-2013, entry version 34.
DE RecName: Full=Pseudouridine synthase;
DE EC=5.4.99.-;
GN OrderedLocusNames=VFMJ11_0576;
OS Vibrio fischeri (strain MJ11).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
OC Vibrionaceae; Aliivibrio.
OX NCBI_TaxID=388396;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MJ11;
RA Mandel M.J., Stabb E.V., Ruby E.G., Ferriera S., Johnson J.,
RA Kravitz S., Beeson K., Sutton G., Rogers Y.-H., Friedman R.,
RA Frazier M., Venter J.C.;
RT "Complete sequence of Vibrio fischeri strain MJ11.";
RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the pseudouridine synthase rluA family.
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DR EMBL; CP001139; ACH66510.1; -; Genomic_DNA.
DR RefSeq; YP_002155322.1; NC_011184.1.
DR ProteinModelPortal; B5FAQ8; -.
DR SMR; B5FAQ8; 2-315.
DR STRING; 388396.VFMJ11_0576; -.
DR EnsemblBacteria; ACH66510; ACH66510; VFMJ11_0576.
DR GeneID; 6806135; -.
DR KEGG; vfm:VFMJ11_0576; -.
DR PATRIC; 20119613; VBIVibFis37164_0551.
DR eggNOG; COG0564; -.
DR HOGENOM; HOG000275919; -.
DR KO; K06180; -.
DR OMA; KTIPAQT; -.
DR ProtClustDB; PRK11180; -.
DR GO; GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0001522; P:pseudouridine synthesis; IEA:InterPro.
DR Gene3D; 3.10.290.10; -; 1.
DR InterPro; IPR020103; PsdUridine_synth_cat_dom.
DR InterPro; IPR006225; PsdUridine_synth_RluC/D.
DR InterPro; IPR006224; PsdUridine_synth_RluC/D_CS.
DR InterPro; IPR006145; PsdUridine_synth_RsuA/RluD.
DR InterPro; IPR002942; S4_RNA-bd.
DR Pfam; PF00849; PseudoU_synth_2; 1.
DR Pfam; PF01479; S4; 1.
DR SMART; SM00363; S4; 1.
DR SUPFAM; SSF55120; PsdUridine_synth_cat_dom; 1.
DR TIGRFAMs; TIGR00005; rluA_subfam; 1.
DR PROSITE; PS01129; PSI_RLU; 1.
DR PROSITE; PS50889; S4; 1.
PE 3: Inferred from homology;
KW Complete proteome; Isomerase.
SQ SEQUENCE 324 AA; 36670 MW; 112C578CE127F1FB CRC64;
MAQQIELTST VKESQLGQRL DQAAAELFSD FSRSRIKEWL LAGNMTVNGE VVTKARLKVM
GGEEITVKAE LEDEERWLAQ DISLDIVYED DDLLVINKPR DFVVHPGAGT PDGTVLNALL
FHYPNIAEVP RAGIVHRLDK DTTGLMVVAK TVPAQTRLVR ALQKRKITRE YEAVVVGRMT
AGGMIEKPIG RHPNKRTLMA VHELGKDAVT HYRVAEHFRI HTRIRLRLET GRTHQIRVHM
SYLQHPLVGD TAYGGRARIP KGASQELIDM IRGFDRQALH AAMLRFEHPI TGETMEFHAP
IPDDMIALSQ ALRDDERLMH EEEY
//
