GenomeNet

Database: UniProt/TrEMBL
Entry: B5ZEK4_GLUDA
LinkDB: B5ZEK4_GLUDA
Original site: B5ZEK4_GLUDA 
ID   B5ZEK4_GLUDA            Unreviewed;       856 AA.
AC   B5ZEK4;
DT   25-NOV-2008, integrated into UniProtKB/TrEMBL.
DT   25-NOV-2008, sequence version 1.
DT   07-JUN-2017, entry version 48.
DE   SubName: Full=DNA ligase D {ECO:0000313|EMBL:ACI51994.1};
GN   OrderedLocusNames=Gdia_2239 {ECO:0000313|EMBL:ACI51994.1};
OS   Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /
OS   PAl5).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
OC   Acetobacteraceae; Gluconacetobacter.
OX   NCBI_TaxID=272568 {ECO:0000313|EMBL:ACI51994.1, ECO:0000313|Proteomes:UP000000736};
RN   [1] {ECO:0000313|EMBL:ACI51994.1, ECO:0000313|Proteomes:UP000000736}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 49037 / DSM 5601 / PAl5
RC   {ECO:0000313|Proteomes:UP000000736};
RX   PubMed=21304715; DOI=10.4056/sigs.972221;
RA   Giongo A., Tyler H.L., Zipperer U.N., Triplett E.W.;
RT   "Two genome sequences of the same bacterial strain, Gluconacetobacter
RT   diazotrophicus PAl 5, suggest a new standard in genome sequence
RT   submission.";
RL   Stand. Genomic Sci. 2:309-317(2010).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001189; ACI51994.1; -; Genomic_DNA.
DR   RefSeq; WP_012554210.1; NC_011365.1.
DR   STRING; 272568.Gdia_2239; -.
DR   EnsemblBacteria; ACI51994; ACI51994; Gdia_2239.
DR   KEGG; gdj:Gdia_2239; -.
DR   eggNOG; ENOG4105DQE; Bacteria.
DR   eggNOG; COG1793; LUCA.
DR   eggNOG; COG3285; LUCA.
DR   HOGENOM; HOG000222509; -.
DR   KO; K01971; -.
DR   OrthoDB; POG091H0AZ9; -.
DR   BioCyc; GDIA272568:GJPS-2236-MONOMER; -.
DR   Proteomes; UP000000736; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000000736};
KW   Ligase {ECO:0000313|EMBL:ACI51994.1}.
FT   DOMAIN      345    427       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   856 AA;  92566 MW;  B45D576B3F000FEB CRC64;
     MALDTYRSKR DFKATPEPEG AEAAEKPDTG AGHLFVIQKH AAHRLHYDLR LEMDGVLKSW
     AVTRGPSLNP GDKRLAVQVE DHPLDYGTFE GTIPKGQYGG GTVMLWDKGT WTPLHDPVRG
     LAKGHLDFEL RGEKLHGRWN LVRMDGHREG THENWLLIKA ADSDARSKND ADILEERPES
     VKTGRAMDDI AAGAPGKDRV GKAAAQKAVT KKAAIPKDAP QADAAATGAA PCAGAKPGPL
     PSFVEPELAT LVRAAPTGPQ WLHEVKFDGY RLLARIEAGR VVLLTRTGLD WTARFGDQIS
     AALASLPVRT ALIDGELVVE TAGGTSDFSA LQADLSAGRT DRFIFYVFDL LHLDGYDLRD
     ATLEARKGAL HDLVPDDAAR LRFSGHFDEA GGQVLRHACR LGLEGIVSKQ RDVPYRSGRG
     RDWVKSKCVA RQEFVIGGYV PSTASRGAVG SLVLGVQENG RLVHVGRVGT GFTAATAADL
     LRRLQPLDVP DSPFAAALTA RERKGVRYVR PDCVAEVEFR AWTADGHLRH AAFLGLREDK
     PAADIVREVE APDPVSSGPS SKPVKPVSPE PAPARPARTL THPDRSYWPD AGVTKQDLAD
     YYAAIWPRMA PFITDRALAL LRCPNGIAGP RFFQKNLWKG AGGHLVPLRD PEGDPGTPLI
     GLRDRDGLID LAQAAALEIH PWGASAQAWD QPDMIVMDLD PGDGVPWSMV IEAAREIRAR
     LERSGLASFV KTTGGKGLHV VAPLKPGADW TAVKAFTRSM AQAMVSDSPQ RYVATITKSR
     RQGRILVDYL RNQRGATAVA PYSPRARPGA PVAMPLAWNE LGPDIGPAHF TIGTIAARLA
     VADPWAEIRD AARPLR
//
DBGET integrated database retrieval system