ID B8C272_THAPS Unreviewed; 153 AA.
AC B8C272;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 03-APR-2013, entry version 20.
DE SubName: Full=Predicted protein;
GN ORFNames=THAPSDRAFT_40669;
OS Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae;
OC Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae;
OC Thalassiosira.
OX NCBI_TaxID=35128;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335;
RX PubMed=15459382; DOI=10.1126/science.1101156;
RA Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M.,
RA Brzezinski M.A., Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S.,
RA Detter J.C., Glavina T., Goodstein D., Hadi M.Z., Hellsten U.,
RA Hildebrand M., Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N.,
RA Lau W.W., Lane T.W., Larimer F.W., Lippmeier J.C., Lucas S.,
RA Medina M., Montsant A., Obornik M., Parker M.S., Palenik B.,
RA Pazour G.J., Richardson P.M., Rynearson T.A., Saito M.A.,
RA Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A., Wilkerson F.P.,
RA Rokhsar D.S.;
RT "The genome of the diatom Thalassiosira pseudonana: ecology,
RT evolution, and metabolism.";
RL Science 306:79-86(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335;
RX PubMed=18923393; DOI=10.1038/nature07410;
RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E.,
RA Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M.,
RA Katinka M., Mock T., Valentin K., Verret F., Berges J.A., Brownlee C.,
RA Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A.,
RA Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M.,
RA Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y.,
RA Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E.,
RA Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M.,
RA McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C.,
RA Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N.,
RA Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H.,
RA Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A.,
RA von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S.,
RA Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA Grigoriev I.V.;
RT "The Phaeodactylum genome reveals the evolutionary history of diatom
RT genomes.";
RL Nature 456:239-244(2008).
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DR EMBL; CM000642; EED91895.1; -; Genomic_DNA.
DR RefSeq; XP_002290143.1; XM_002290107.1.
DR ProteinModelPortal; B8C272; -.
DR STRING; 35128.JGI40669; -.
DR EnsemblProtists; Thaps40669; Thaps40669; Thaps40669.
DR GeneID; 7451773; -.
DR KEGG; tps:THAPSDRAFT_40669; -.
DR eggNOG; COG5272; -.
DR HOGENOM; HOG000233943; -.
DR KO; K02977; -.
DR ProtClustDB; CLSN2682087; -.
DR GO; GO:0005840; C:ribosome; IEA:InterPro.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR InterPro; IPR002906; Ribosomal_S27a.
DR InterPro; IPR000626; Ubiquitin.
DR InterPro; IPR019954; Ubiquitin_CS.
DR InterPro; IPR019956; Ubiquitin_subgr.
DR InterPro; IPR019955; Ubiquitin_supergroup.
DR Pfam; PF01599; Ribosomal_S27; 1.
DR Pfam; PF00240; ubiquitin; 1.
DR PRINTS; PR00348; UBIQUITIN.
DR SMART; SM00213; UBQ; 1.
DR PROSITE; PS00299; UBIQUITIN_1; 1.
DR PROSITE; PS50053; UBIQUITIN_2; 1.
PE 4: Predicted;
KW Complete proteome; Reference proteome.
SQ SEQUENCE 153 AA; 17566 MW; B0BBE445B2D8A659 CRC64;
MQIFVKTLTG KTITLDVEPS DTIDNVKTKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN
IQKESTLHLV LRLRGGGKKR KKKVYTKPKK AKRVNKTIPL QTLKYYRVED GGKVVRLRKY
SPVAGIGCFM AQHHDRYYCG KSGTTFLYED MKE
//
