ID B8LDG0_THAPS Unreviewed; 332 AA.
AC B8LDG0;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 01-MAY-2013, entry version 25.
DE SubName: Full=Chitinase;
DE Flags: Fragment;
GN ORFNames=THAPSDRAFT_264602;
OS Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae;
OC Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae;
OC Thalassiosira.
OX NCBI_TaxID=35128;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335;
RX PubMed=15459382; DOI=10.1126/science.1101156;
RA Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M.,
RA Brzezinski M.A., Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S.,
RA Detter J.C., Glavina T., Goodstein D., Hadi M.Z., Hellsten U.,
RA Hildebrand M., Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N.,
RA Lau W.W., Lane T.W., Larimer F.W., Lippmeier J.C., Lucas S.,
RA Medina M., Montsant A., Obornik M., Parker M.S., Palenik B.,
RA Pazour G.J., Richardson P.M., Rynearson T.A., Saito M.A.,
RA Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A., Wilkerson F.P.,
RA Rokhsar D.S.;
RT "The genome of the diatom Thalassiosira pseudonana: ecology,
RT evolution, and metabolism.";
RL Science 306:79-86(2004).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=CCMP1335;
RG Diatom Consortium;
RA Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A.,
RA Detter J.C., Schmutz J., Lindquist E., Shapiro H., Lucas S.,
RA Glavina del Rio T., Bruce D., Pitluck S., Rokhsar D., Armbrust V.;
RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 18 family.
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DR EMBL; DS999419; EED86703.1; -; Genomic_DNA.
DR RefSeq; XP_002296975.1; XM_002296939.1.
DR ProteinModelPortal; B8LDG0; -.
DR EnsemblProtists; Thaps264602; Thaps264602; Thaps264602.
DR GeneID; 7449949; -.
DR KEGG; tps:THAPSDRAFT_264602; -.
DR eggNOG; COG3325; -.
DR HOGENOM; HOG000048618; -.
DR KO; K01183; -.
DR ProtClustDB; CLSN2712882; -.
DR GO; GO:0004568; F:chitinase activity; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR GO; GO:0006032; P:chitin catabolic process; IEA:InterPro.
DR Gene3D; 3.20.20.80; -; 2.
DR InterPro; IPR011583; Chitinase_II.
DR InterPro; IPR001223; Glyco_hydro18cat.
DR InterPro; IPR001579; Glyco_hydro_18_chit_AS.
DR InterPro; IPR013781; Glyco_hydro_catalytic_dom.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR Pfam; PF00704; Glyco_hydro_18; 1.
DR SMART; SM00636; Glyco_18; 1.
DR SUPFAM; SSF51445; Glyco_hydro_cat; 1.
DR PROSITE; PS01095; CHITINASE_18; 1.
PE 3: Inferred from homology;
KW Complete proteome; Glycosidase; Hydrolase; Reference proteome.
FT NON_TER 1 1
FT NON_TER 332 332
SQ SEQUENCE 332 AA; 37437 MW; 3261A3AC1FA698B4 CRC64;
LGYYSSWADT RWCNQIQPDE IDVQKFGYTH LVYAFGGISE EGEIESFYGN TLEYAEFQKF
NSLKNDNPEL KTLLAIGGWN FDQTRFSSVS SSPSRRRKFA KSVVVFLETH GFDGVDLDWE
YPVTRMGVPE DYGNYPKLCR AIMEEFQRSG HEDYILSVAT SISVQHLQDG FDLVEMAPWV
SFFNVMSYDI YGSWHDVAGA LAGLDYISNT FDYMLGLGVN PSKFVLGLAA YGRSTKLVDS
NCTTAGCPID GAGMTGCLGE PGVIPTFELV DFMETGNYLS LVKNNETDTM EMVNEIDGDI
FFTSFDSEET FNIKYQYAFT NCLRGIMWWA VD
//
