ID C5CVG5_VARPS Unreviewed; 554 AA.
AC C5CVG5;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 24-JAN-2024, entry version 61.
DE SubName: Full=Alpha amylase catalytic region {ECO:0000313|EMBL:ACS18614.1};
GN OrderedLocusNames=Vapar_1968 {ECO:0000313|EMBL:ACS18614.1};
OS Variovorax paradoxus (strain S110).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=543728 {ECO:0000313|EMBL:ACS18614.1};
RN [1] {ECO:0000313|EMBL:ACS18614.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=S110 {ECO:0000313|EMBL:ACS18614.1};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D.,
RA Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Orwin P.,
RA Leadbetter J.R., Spain J.C., Han J.I.;
RT "Complete sequence of chromosome 1 of Variovorax paradoxus S110.";
RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP001635; ACS18614.1; -; Genomic_DNA.
DR AlphaFoldDB; C5CVG5; -.
DR STRING; 543728.Vapar_1968; -.
DR CAZy; GH13; Glycoside Hydrolase Family 13.
DR KEGG; vap:Vapar_1968; -.
DR eggNOG; COG0366; Bacteria.
DR HOGENOM; CLU_006462_2_1_4; -.
DR OMA; CARTPMQ; -.
DR OrthoDB; 9805159at2; -.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR CDD; cd11334; AmyAc_TreS; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR045857; O16G_dom_2.
DR PANTHER; PTHR10357; ALPHA-AMYLASE FAMILY MEMBER; 1.
DR PANTHER; PTHR10357:SF219; MALTOSE ALPHA-D-GLUCOSYLTRANSFERASE; 1.
DR Pfam; PF00128; Alpha-amylase; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE 4: Predicted;
FT DOMAIN 14..408
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
SQ SEQUENCE 554 AA; 63911 MW; 28B5FC230507363B CRC64;
MINDLWYKNA VVYCLSVGTF MDSNGDGCGD FEGLTRRLEY LHGLGVTTLW LMPFHPSPRQ
DDGYDVSDFY NVDPRFGTLG DFVEFTHSAS RLGMRVLMDL VVNHTSDQHP WFQQARRDRK
SKYHNWYVWS DRKPARYTDG VVFPGVQKST WTFDKLARRW YFHRFYEFQP DLNTANPDVQ
AEILKIMGFW TQMGVSGFRM DAVPFVIGAK GPRVVRPTEK FDMLRQFREL LQWRRGDAII
LAEANVLPST NMAYFGDEGE RLHMMFNFQV NQHLFYAMAV ADARPLAKAL EATRARPATS
QWGIFLRNHD ELDLGRLRPA QRQRVFAAFG PEKDMQLYDR GIRRRLAPML GGNRRRLELA
YSLMLTLPGT PVVRYGDEIG MGDDLSLPER NCARTPMQWS TERQGGFTTS SKPVLPVITG
GAYGFEHVNV AAQRRDPESL LNWMERVFRM RKEVPEIGWG DFEVVPNEER AVLVMRYEWR
GNAAVFVHNL GDSPLEIKLG AKALGRHGGQ LINLLSNAHS RANSKGKHCM LLEPYGYRWF
RVGPLDYLLK REEM
//