GenomeNet

Database: UniProt/TrEMBL
Entry: C5CVG5_VARPS
LinkDB: C5CVG5_VARPS
Original site: C5CVG5_VARPS 
ID   C5CVG5_VARPS            Unreviewed;       554 AA.
AC   C5CVG5;
DT   28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   28-JUL-2009, sequence version 1.
DT   24-JAN-2024, entry version 61.
DE   SubName: Full=Alpha amylase catalytic region {ECO:0000313|EMBL:ACS18614.1};
GN   OrderedLocusNames=Vapar_1968 {ECO:0000313|EMBL:ACS18614.1};
OS   Variovorax paradoxus (strain S110).
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=543728 {ECO:0000313|EMBL:ACS18614.1};
RN   [1] {ECO:0000313|EMBL:ACS18614.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=S110 {ECO:0000313|EMBL:ACS18614.1};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D.,
RA   Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C.,
RA   Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Orwin P.,
RA   Leadbetter J.R., Spain J.C., Han J.I.;
RT   "Complete sequence of chromosome 1 of Variovorax paradoxus S110.";
RL   Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP001635; ACS18614.1; -; Genomic_DNA.
DR   AlphaFoldDB; C5CVG5; -.
DR   STRING; 543728.Vapar_1968; -.
DR   CAZy; GH13; Glycoside Hydrolase Family 13.
DR   KEGG; vap:Vapar_1968; -.
DR   eggNOG; COG0366; Bacteria.
DR   HOGENOM; CLU_006462_2_1_4; -.
DR   OMA; CARTPMQ; -.
DR   OrthoDB; 9805159at2; -.
DR   GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR   CDD; cd11334; AmyAc_TreS; 1.
DR   Gene3D; 3.20.20.80; Glycosidases; 1.
DR   Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR   InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR   InterPro; IPR013780; Glyco_hydro_b.
DR   InterPro; IPR017853; Glycoside_hydrolase_SF.
DR   InterPro; IPR045857; O16G_dom_2.
DR   PANTHER; PTHR10357; ALPHA-AMYLASE FAMILY MEMBER; 1.
DR   PANTHER; PTHR10357:SF219; MALTOSE ALPHA-D-GLUCOSYLTRANSFERASE; 1.
DR   Pfam; PF00128; Alpha-amylase; 1.
DR   SMART; SM00642; Aamy; 1.
DR   SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR   SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE   4: Predicted;
FT   DOMAIN          14..408
FT                   /note="Glycosyl hydrolase family 13 catalytic"
FT                   /evidence="ECO:0000259|SMART:SM00642"
SQ   SEQUENCE   554 AA;  63911 MW;  28B5FC230507363B CRC64;
     MINDLWYKNA VVYCLSVGTF MDSNGDGCGD FEGLTRRLEY LHGLGVTTLW LMPFHPSPRQ
     DDGYDVSDFY NVDPRFGTLG DFVEFTHSAS RLGMRVLMDL VVNHTSDQHP WFQQARRDRK
     SKYHNWYVWS DRKPARYTDG VVFPGVQKST WTFDKLARRW YFHRFYEFQP DLNTANPDVQ
     AEILKIMGFW TQMGVSGFRM DAVPFVIGAK GPRVVRPTEK FDMLRQFREL LQWRRGDAII
     LAEANVLPST NMAYFGDEGE RLHMMFNFQV NQHLFYAMAV ADARPLAKAL EATRARPATS
     QWGIFLRNHD ELDLGRLRPA QRQRVFAAFG PEKDMQLYDR GIRRRLAPML GGNRRRLELA
     YSLMLTLPGT PVVRYGDEIG MGDDLSLPER NCARTPMQWS TERQGGFTTS SKPVLPVITG
     GAYGFEHVNV AAQRRDPESL LNWMERVFRM RKEVPEIGWG DFEVVPNEER AVLVMRYEWR
     GNAAVFVHNL GDSPLEIKLG AKALGRHGGQ LINLLSNAHS RANSKGKHCM LLEPYGYRWF
     RVGPLDYLLK REEM
//
DBGET integrated database retrieval system