GenomeNet

Database: UniProt/TrEMBL
Entry: C6Y121_PEDHD
LinkDB: C6Y121_PEDHD
Original site: C6Y121_PEDHD 
ID   C6Y121_PEDHD            Unreviewed;       416 AA.
AC   C6Y121;
DT   22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   22-SEP-2009, sequence version 1.
DT   25-OCT-2017, entry version 50.
DE   SubName: Full=Ribulose-bisphosphate carboxylase {ECO:0000313|EMBL:ACU04948.1};
DE            EC=4.1.1.39 {ECO:0000313|EMBL:ACU04948.1};
GN   OrderedLocusNames=Phep_2747 {ECO:0000313|EMBL:ACU04948.1};
OS   Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM
OS   7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3).
OC   Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales;
OC   Sphingobacteriaceae; Pedobacter.
OX   NCBI_TaxID=485917 {ECO:0000313|EMBL:ACU04948.1, ECO:0000313|Proteomes:UP000000852};
RN   [1] {ECO:0000313|EMBL:ACU04948.1, ECO:0000313|Proteomes:UP000000852}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 /
RC   NCIMB 9290 / NRRL B-14731 / HIM 762-3
RC   {ECO:0000313|Proteomes:UP000000852};
RX   PubMed=21304637; DOI=10.4056/sigs.22138;
RA   Han C., Spring S., Lapidus A., Del Rio T.G., Tice H., Copeland A.,
RA   Cheng J.F., Lucas S., Chen F., Nolan M., Bruce D., Goodwin L.,
RA   Pitluck S., Ivanova N., Mavromatis K., Mikhailova N., Pati A.,
RA   Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.C., Saunders E., Chertkov O., Brettin T., Goker M.,
RA   Rohde M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Kyrpides N.C., Klenk H.P., Detter J.C.;
RT   "Complete genome sequence of Pedobacter heparinus type strain (HIM
RT   762-3).";
RL   Stand. Genomic Sci. 1:54-62(2009).
CC   -!- SIMILARITY: Belongs to the RuBisCO large chain family.
CC       {ECO:0000256|RuleBase:RU003834}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001681; ACU04948.1; -; Genomic_DNA.
DR   RefSeq; WP_015808559.1; NZ_AQGK01000001.1.
DR   ProteinModelPortal; C6Y121; -.
DR   STRING; 485917.Phep_2747; -.
DR   EnsemblBacteria; ACU04948; ACU04948; Phep_2747.
DR   KEGG; phe:Phep_2747; -.
DR   eggNOG; ENOG4105DT1; Bacteria.
DR   eggNOG; COG1850; LUCA.
DR   HOGENOM; HOG000230831; -.
DR   KO; K01601; -.
DR   OMA; HRAMHAA; -.
DR   OrthoDB; POG091H2GZ2; -.
DR   BioCyc; PHEP485917:GHL9-2747-MONOMER; -.
DR   Proteomes; UP000000852; Chromosome.
DR   GO; GO:0000287; F:magnesium ion binding; IEA:InterPro.
DR   GO; GO:0016984; F:ribulose-bisphosphate carboxylase activity; IEA:UniProtKB-EC.
DR   GO; GO:0015977; P:carbon fixation; IEA:InterPro.
DR   Gene3D; 3.20.20.110; -; 1.
DR   Gene3D; 3.30.70.150; -; 1.
DR   InterPro; IPR033966; RuBisCO.
DR   InterPro; IPR020878; RuBisCo_large_chain_AS.
DR   InterPro; IPR000685; RuBisCO_lsu_C.
DR   InterPro; IPR036376; RuBisCO_lsu_C_sf.
DR   InterPro; IPR017443; RuBisCO_lsu_fd_N.
DR   InterPro; IPR036422; RuBisCO_lsu_N_sf.
DR   Pfam; PF00016; RuBisCO_large; 1.
DR   Pfam; PF02788; RuBisCO_large_N; 1.
DR   SFLD; SFLDS00014; RuBisCO; 1.
DR   SUPFAM; SSF51649; SSF51649; 1.
DR   SUPFAM; SSF54966; SSF54966; 1.
DR   PROSITE; PS00157; RUBISCO_LARGE; 1.
PE   3: Inferred from homology;
KW   Complete proteome {ECO:0000313|Proteomes:UP000000852};
KW   Lyase {ECO:0000313|EMBL:ACU04948.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000852}.
FT   DOMAIN        7    123       RuBisCO_large_N. {ECO:0000259|Pfam:
FT                                PF02788}.
FT   DOMAIN      133    410       RuBisCO_large. {ECO:0000259|Pfam:
FT                                PF00016}.
SQ   SEQUENCE   416 AA;  44985 MW;  A020F12581DA133D CRC64;
     MERITAKYYI ETPLDLEKSA QLLAGEQSSG TFIAVPGETE ELKQRFAARV ESITPMDTAN
     EPAIPGVLSA GGKYQRAMIE VSWSIENFGY NLPVMVSTLQ GNLYELTQFT GLKLMDLELP
     ASFATAFKGP KFGIAGCRKL TGVYNRPLIG TIIKPSIGMT PEQTAALVNT LALAGIDFIK
     DDELLGSSAN SPFDKRVDAI MEVINRHADR SGKKVMYAFN ISDDIDQMQR NYEKILRSGG
     TSAMISLNSV GLAGVKKIGE IGELAIHGHR NGWGMLNRHP LLGIEFPAYQ QLWRLAGVDQ
     IHVNGIQNKF WESDDSVVRS IEACFKPLLG GYSVLPVVSS GQWGGQAVET YRRVPSVDLL
     YMAGGGIMAH PDGPAGGVVA LQQAWQGAVD GLSVAETAAK YPEFGHSVSV FGKKQA
//
DBGET integrated database retrieval system