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Database: UniProt/TrEMBL
Entry: C7PLF2_CHIPD
LinkDB: C7PLF2_CHIPD
Original site: C7PLF2_CHIPD 
ID   C7PLF2_CHIPD            Unreviewed;       861 AA.
AC   C7PLF2;
DT   13-OCT-2009, integrated into UniProtKB/TrEMBL.
DT   13-OCT-2009, sequence version 1.
DT   07-JUN-2017, entry version 43.
DE   SubName: Full=DNA ligase D {ECO:0000313|EMBL:ACU58496.1};
GN   OrderedLocusNames=Cpin_0998 {ECO:0000313|EMBL:ACU58496.1};
OS   Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM
OS   2034).
OC   Bacteria; Bacteroidetes; Chitinophagia; Chitinophagales;
OC   Chitinophagaceae; Chitinophaga.
OX   NCBI_TaxID=485918 {ECO:0000313|EMBL:ACU58496.1, ECO:0000313|Proteomes:UP000002215};
RN   [1] {ECO:0000313|Proteomes:UP000002215}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034
RC   {ECO:0000313|Proteomes:UP000002215};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E.,
RA   Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K.,
RA   Ivanova N., Mikhailova N., Sims D., Meinche L., Brettin T.,
RA   Detter J.C., Han C., Larimer F., Land M., Hauser L., Markowitz V.,
RA   Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Klenk H.-P.,
RA   Eisen J.A.;
RT   "The complete genome of Chitinophaga pinensis DSM 2588.";
RL   Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP001699; ACU58496.1; -; Genomic_DNA.
DR   RefSeq; WP_012788672.1; NC_013132.1.
DR   STRING; 485918.Cpin_0998; -.
DR   EnsemblBacteria; ACU58496; ACU58496; Cpin_0998.
DR   KEGG; cpi:Cpin_0998; -.
DR   eggNOG; ENOG4105DQE; Bacteria.
DR   eggNOG; COG1793; LUCA.
DR   eggNOG; COG3285; LUCA.
DR   HOGENOM; HOG000222509; -.
DR   KO; K01971; -.
DR   OMA; AMMVEDH; -.
DR   OrthoDB; POG091H0AZ9; -.
DR   Proteomes; UP000002215; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000002215};
KW   Ligase {ECO:0000313|EMBL:ACU58496.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002215}.
FT   DOMAIN      316    460       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   861 AA;  97908 MW;  05A68344544BD12D CRC64;
     MSSLKTYDEK RDFKQTAEPK GAKKKSGGKQ HIFVIQRHHA SRLHYDFRLE VDGVLKSWAV
     PKGPSMNPAD KRLAMQVEDH PYDYKDFEGV IPEGNYGAGY VYVWDKGNYE LLREDGSSFD
     KEANKEIREG DLKIRLKGRK VKGEFALVKM KNSEDNAWLL LKHKDDYAVK DAYNSEDFTP
     QRVKDRGVKE KEKMKGAGKK KAGLTKVKTA PQTEKTVKKN KRQQELFTPM MATLVDAPFS
     REGWLFETKW DGYRAIADVR KGKVELYSRN HLSFNKDYAP VVKALESLQH DAVLDGEIVI
     LKKDGTSDFQ SLQNYKNDPS GNLVYVVFDL LELDGEDLKA MPLIQRKELL KTVVKQLKRK
     DVIYSDHVMD NSDALYKQAK EKGWEGIIAK EADSLYAEGK RAMAWLKIKI IDEQEAIICG
     YTDPKGSRKK IGSLVLGVYD DKQQLRYVGN CGGGLNGALI NELYEKMQPL RQKTSPFDKK
     IRTNTPVTWV KPQLVCQVKF SSWTSDKQLR QPVFLGLRKD KPAEEVHQET AKPTKMATKK
     AAATAAPVKA TPEKERVVTL NSKKVPLTNQ QKLYWPDEKV TKGDLIDYYM DMADYVLPYL
     KDRPLSLHRF PNGIKDAGFY QKDVDTESAP DWVKTVTLHA ASASRDVDYL VCNNAATLVY
     MANLGCIEMN PWLSRVKNLD HPDYIVLDLD PENIAFKYVV ETALAIKELL DKVGVKSFCK
     TSGASGLHIY VPTGGKYNYE TCRLFAEYVA KQVQQELPKI TNVIRTKSKR NKKVYIDYMQ
     NSRGQTVASP YSVRPKPGAT VSAPLDWKEL NDDLAISNFT MENMRDRIRA VGDLWKDIDK
     TKNDLRKAIE KVESIAAAHV E
//
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