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Database: UniProt/TrEMBL
Entry: C9SP42_VERA1
LinkDB: C9SP42_VERA1
Original site: C9SP42_VERA1 
ID   C9SP42_VERA1            Unreviewed;       944 AA.
AC   C9SP42;
DT   24-NOV-2009, integrated into UniProtKB/TrEMBL.
DT   24-NOV-2009, sequence version 1.
DT   28-FEB-2018, entry version 52.
DE   SubName: Full=DNA ligase {ECO:0000313|EMBL:EEY20557.1};
GN   ORFNames=VDBG_06667 {ECO:0000313|EMBL:EEY20557.1};
OS   Verticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136)
OS   (Verticillium wilt of alfalfa) (Verticillium albo-atrum).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
OC   Sordariomycetes; Hypocreomycetidae; Glomerellales;
OC   Plectosphaerellaceae; Verticillium.
OX   NCBI_TaxID=526221 {ECO:0000313|Proteomes:UP000008698};
RN   [1] {ECO:0000313|Proteomes:UP000008698}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=VaMs.102 / ATCC MYA-4576 / FGSC 10136
RC   {ECO:0000313|Proteomes:UP000008698};
RX   PubMed=21829347; DOI=10.1371/journal.ppat.1002137;
RA   Klosterman S.J., Subbarao K.V., Kang S., Veronese P., Gold S.E.,
RA   Thomma B.P.H.J., Chen Z., Henrissat B., Lee Y.-H., Park J.,
RA   Garcia-Pedrajas M.D., Barbara D.J., Anchieta A., de Jonge R.,
RA   Santhanam P., Maruthachalam K., Atallah Z., Amyotte S.G., Paz Z.,
RA   Inderbitzin P., Hayes R.J., Heiman D.I., Young S., Zeng Q., Engels R.,
RA   Galagan J., Cuomo C.A., Dobinson K.F., Ma L.-J.;
RT   "Comparative genomics yields insights into niche adaptation of plant
RT   vascular wilt pathogens.";
RL   PLoS Pathog. 7:E1002137-E1002137(2011).
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DR   EMBL; DS985221; EEY20557.1; -; Genomic_DNA.
DR   RefSeq; XP_003003105.1; XM_003003059.1.
DR   ProteinModelPortal; C9SP42; -.
DR   STRING; 526221.XP_003003105.1; -.
DR   EnsemblFungi; EEY20557; EEY20557; VDBG_06667.
DR   GeneID; 9537149; -.
DR   KEGG; val:VDBG_06667; -.
DR   eggNOG; KOG0966; Eukaryota.
DR   eggNOG; COG1793; LUCA.
DR   KO; K10777; -.
DR   OrthoDB; EOG092C18KW; -.
DR   Proteomes; UP000008698; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0051103; P:DNA ligation involved in DNA repair; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   CDD; cd00027; BRCT; 1.
DR   Gene3D; 1.10.3260.10; -; 1.
DR   Gene3D; 3.40.50.10190; -; 2.
DR   InterPro; IPR001357; BRCT_dom.
DR   InterPro; IPR036420; BRCT_dom_sf.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR012308; DNA_ligase_ATP-dep_N.
DR   InterPro; IPR036599; DNA_ligase_N_sf.
DR   InterPro; IPR029710; LIG4.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   PANTHER; PTHR10459:SF7; PTHR10459:SF7; 1.
DR   Pfam; PF16589; BRCT_2; 1.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF04675; DNA_ligase_A_N; 1.
DR   SMART; SM00292; BRCT; 2.
DR   SUPFAM; SSF117018; SSF117018; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   SUPFAM; SSF52113; SSF52113; 2.
DR   PROSITE; PS50172; BRCT; 2.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000008698};
KW   Ligase {ECO:0000313|EMBL:EEY20557.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008698}.
FT   DOMAIN      389    514       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
FT   DOMAIN      679    759       BRCT. {ECO:0000259|PROSITE:PS50172}.
FT   DOMAIN      843    944       BRCT. {ECO:0000259|PROSITE:PS50172}.
FT   COILED      635    655       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   944 AA;  107488 MW;  448065C4B55155B6 CRC64;
     MSHREGQPSP SAAAIGEDER QYAVGGMTSQ EVNENYPGRP RNHSETFLFS ELFKSLFNPL
     MENKKQPPGS GPPRAKLGPH GPSKPSPSEQ RRHIIDRFIS RWRKNVGHDF YPAMRLILPD
     KDRDRGVYGL KENAIGKLLV KLMKIDKNSE DGYNLLHWKL PGQTTASRMA GDFAGRAFEV
     LSKRPMRIEV GDMTIADVNE LLDKLAGSSG ELENLEVFET FYERMNAEEL MWLIRIILKQ
     MKVGATEKTL LHLWHPDAET LFNVSSSLRR VCWELFDPQV RLEQENTGVT LMQCFQPQLA
     QFQMPASFQK MVDYLRPPRG SRGLKDDRGA WTRHLGKAFA AGVRNIILDG EMITWDPDTD
     KIMQFGTLKT AALAEQKNPY NNTGPRPLFR VFDILYLNDQ PLTRYTLRDR YNALRKAVIG
     VHRRIEVHEH EAATSADAIE PLLRKVVAEA SEGLVLKNPR SMYRLNSRND DWLKVKPEYM
     TEFGESLDCV VIGGYYGSGK RGGILSTYLC GLRVSENHIK AGANPEKCFS LFKVGGGFSV
     EDYAEIRHHT DGKWKDWDPK KPPNEYIELA HGFAEKPDVW IRPKDSFVLE AKASSVGPSD
     QFALGFTLRF PRFRKLRKDK SWDQGLSVQE FQDLRRRVEE EAQEKTMSVE NTKRRAVKRV
     KKELVIAGTD STPVQFEGEK SKVFEGLEFC VLSESLKPFK KTKTQLETTI KANGGRITQR
     HAARSDLILI ADKRVVSVAS LIKKGDVDII RPNWVQDCLA QETDDGLLPY EERHLFHATE
     GLREIARQNT DEFGDSYFRI VDVEELRQIL VDMSPHEKSE ERDEDAAEFA RQLKERGNDL
     GERDSAVFGR CVVHLHVLPG GELDAFRLRN YIAFGGGEVT DGLPVDSSTH IMLVGGRDAE
     KQDAAVSVRK DIGNRQKIPR VVASQWVEDS WKERTMLDEE RYRV
//
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