ID D1BWG2_XYLCX Unreviewed; 270 AA.
AC D1BWG2;
DT 19-JAN-2010, integrated into UniProtKB/TrEMBL.
DT 19-JAN-2010, sequence version 1.
DT 01-MAY-2013, entry version 27.
DE RecName: Full=RNA polymerase sigma factor;
GN OrderedLocusNames=Xcel_2492;
OS Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990
OS / XIL07).
OC Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC Micrococcineae; Promicromonosporaceae; Xylanimonas.
OX NCBI_TaxID=446471;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 15894 / CECT 5975 / LMG 20990 / XIL07;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E.,
RA Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K.,
RA Ivanova N., Mikhailova N., Foster B., Clum A., Brettin T.,
RA Detter J.C., Han C., Larimer F., Land M., Hauser L., Markowitz V.,
RA Cheng J.F., Hugenholtz P., Woyke T., Wu D., Gehrich-Schroeter G.,
RA Schneider S., Pukall S.R., Klenk H.P., Eisen J.A.;
RT "The complete chromosome of Xylanimonas cellulosilytica DSM 15894.";
RL Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
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DR EMBL; CP001821; ACZ31507.1; -; Genomic_DNA.
DR RefSeq; YP_003327065.1; NC_013530.1.
DR EnsemblBacteria; ACZ31507; ACZ31507; Xcel_2492.
DR GeneID; 8650035; -.
DR KEGG; xce:Xcel_2492; -.
DR PATRIC; 32554027; VBIXylCel24446_2532.
DR HOGENOM; HOG000094755; -.
DR KO; K03088; -.
DR OMA; GRRQLRD; -.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-dependent transcription, initiation; IEA:InterPro.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR014293; RNA_pol_sigma70_actinobac.
DR InterPro; IPR000838; RNA_pol_sigma70_ECF_CS.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3_r4.
DR InterPro; IPR011991; WHTH_DNA-bd_dom.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma_r2; 1.
DR SUPFAM; SSF88659; Sigma_r3_r4; 1.
DR TIGRFAMs; TIGR02947; SigH_actino; 1.
DR TIGRFAMs; TIGR02937; sigma70-ECF; 1.
DR PROSITE; PS01063; SIGMA70_ECF; 1.
PE 3: Inferred from homology;
KW Complete proteome; DNA-binding; Sigma factor; Transcription;
KW Transcription regulation.
SQ SEQUENCE 270 AA; 29476 MW; 79FB4E54E9C267D2 CRC64;
MNAALVEDVP LFALPSHVDG VTKAAPPAGA WPVTAIGQGL GSAPMSEDPT GLPADDVAAA
DDDGTARAPQ HEDPAARAAR FERDALQHLD QLYSAALRMT RNPADAEDLV QETFAKAFAA
FHQYRPGTNL KAWLYRILTN TFINTYRKKQ REPQQSQAED VEDWQIARAA SHTSQGLRSA
EVEALDHLPD SDVKRALAAL PEDRRMVVYY ADVEGFPYKE IAEIMGTPIG TVMSRLHRGR
KQLRDLLADY AVERGLVPAS DPVQAHGGSK
//
