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Database: UniProt/TrEMBL
Entry: D3FTC6_BACPE
LinkDB: D3FTC6_BACPE
Original site: D3FTC6_BACPE 
ID   D3FTC6_BACPE            Unreviewed;       237 AA.
AC   D3FTC6;
DT   23-MAR-2010, integrated into UniProtKB/TrEMBL.
DT   23-MAR-2010, sequence version 1.
DT   26-NOV-2014, entry version 29.
DE   RecName: Full=RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715};
GN   Name=sigE {ECO:0000313|EMBL:ADC48194.1};
GN   OrderedLocusNames=BpOF4_00625 {ECO:0000313|EMBL:ADC48194.1};
OS   Bacillus pseudofirmus (strain OF4).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX   NCBI_TaxID=398511 {ECO:0000313|EMBL:ADC48194.1, ECO:0000313|Proteomes:UP000001544};
RN   [1] {ECO:0000313|EMBL:ADC48194.1, ECO:0000313|Proteomes:UP000001544}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=OF4 {ECO:0000313|EMBL:ADC48194.1,
RC   ECO:0000313|Proteomes:UP000001544};
RX   PubMed=21951522; DOI=10.1111/j.1462-2920.2011.02591.x;
RA   Janto B., Ahmed A., Ito M., Liu J., Hicks D.B., Pagni S.,
RA   Fackelmayer O.J., Smith T.A., Earl J., Elbourne L.D., Hassan K.,
RA   Paulsen I.T., Kolsto A.B., Tourasse N.J., Ehrlich G.D., Boissy R.,
RA   Ivey D.M., Li G., Xue Y., Ma Y., Hu F.Z., Krulwich T.A.;
RT   "Genome of alkaliphilic Bacillus pseudofirmus OF4 reveals adaptations
RT   that support the ability to grow in an external pH range from 7.5 to
RT   11.4.";
RL   Environ. Microbiol. 13:3289-3309(2011).
CC   -!- FUNCTION: Sigma factors are initiation factors that promote the
CC       attachment of RNA polymerase to specific initiation sites and are
CC       then released. {ECO:0000256|RuleBase:RU000715}.
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family.
CC       {ECO:0000256|RuleBase:RU000715}.
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DR   EMBL; CP001878; ADC48194.1; -; Genomic_DNA.
DR   RefSeq; YP_003425086.1; NC_013791.2.
DR   EnsemblBacteria; ADC48194; ADC48194; BpOF4_00625.
DR   GeneID; 8765097; -.
DR   KEGG; bpf:BpOF4_00625; -.
DR   PATRIC; 31942724; VBIBacPse80461_0124.
DR   HOGENOM; HOG000270274; -.
DR   KO; K03091; -.
DR   BioCyc; BPSE398511:GJI9-2536-MONOMER; -.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   GO; GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR014200; RNA_pol_sigma-E.
DR   InterPro; IPR016263; RNA_pol_sigma-SigE/K.
DR   InterPro; IPR000943; RNA_pol_sigma70.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3_r4.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   PIRSF; PIRSF000770; RNA_pol_sigma-SigE/K; 1.
DR   PRINTS; PR00046; SIGMA70FCT.
DR   SUPFAM; SSF88659; SSF88659; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
DR   TIGRFAMs; TIGR02835; spore_sigmaE; 1.
DR   PROSITE; PS00715; SIGMA70_1; 1.
DR   PROSITE; PS00716; SIGMA70_2; 1.
PE   3: Inferred from homology;
KW   Complete proteome {ECO:0000313|Proteomes:UP000001544};
KW   DNA-binding {ECO:0000256|RuleBase:RU000715,
KW   ECO:0000256|SAAS:SAAS00078015};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001544};
KW   Sigma factor {ECO:0000256|RuleBase:RU000715,
KW   ECO:0000256|SAAS:SAAS00078373};
KW   Transcription {ECO:0000256|RuleBase:RU000715,
KW   ECO:0000256|SAAS:SAAS00078162};
KW   Transcription regulation {ECO:0000256|RuleBase:RU000715,
KW   ECO:0000256|SAAS:SAAS00078074}.
SQ   SEQUENCE   237 AA;  27460 MW;  1C4005D906F99C7F CRC64;
     MLKLKLRLLW YRIMHKLGMK PDEIYYIGGS EALPPPLSKE EEAVLLKKLP TGDKAVRSML
     IERNLRLVVY IARKFENTGI NIEDLISIGT IGLIKAVNTF NPEKKIKLAT YASRCIENEI
     LMYLRRNNKT RSEVSFDEPL NIDWDGNELL LSDVLGTEED IITRGIEEKV DRKLLVKALH
     TLNEREKQIM ELRFGLAGEE EKTQKDVADM LGISQSYISR LEKRIIKRLQ KEFNKMV
//
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