ID D6RLC0_COPC7 Unreviewed; 692 AA.
AC D6RLC0;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 24-JAN-2024, entry version 65.
DE SubName: Full=Histone deacetylase clr3 {ECO:0000313|EMBL:EFI28108.1};
GN ORFNames=CC1G_14135 {ECO:0000313|EMBL:EFI28108.1};
OS Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)
OS (Inky cap fungus) (Hormographiella aspergillata).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Agaricomycetidae; Agaricales; Agaricineae; Psathyrellaceae; Coprinopsis.
OX NCBI_TaxID=240176 {ECO:0000313|EMBL:EFI28108.1, ECO:0000313|Proteomes:UP000001861};
RN [1] {ECO:0000313|EMBL:EFI28108.1, ECO:0000313|Proteomes:UP000001861}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003
RC {ECO:0000313|Proteomes:UP000001861};
RX PubMed=20547848; DOI=10.1073/pnas.1003391107;
RA Stajich J.E., Wilke S.K., Ahren D., Au C.H., Birren B.W., Borodovsky M.,
RA Burns C., Canback B., Casselton L.A., Cheng C.K., Deng J., Dietrich F.S.,
RA Fargo D.C., Farman M.L., Gathman A.C., Goldberg J., Guigo R., Hoegger P.J.,
RA Hooker J.B., Huggins A., James T.Y., Kamada T., Kilaru S., Kodira C.,
RA Kues U., Kupfer D., Kwan H.S., Lomsadze A., Li W., Lilly W.W., Ma L.J.,
RA Mackey A.J., Manning G., Martin F., Muraguchi H., Natvig D.O.,
RA Palmerini H., Ramesh M.A., Rehmeyer C.J., Roe B.A., Shenoy N., Stanke M.,
RA Ter-Hovhannisyan V., Tunlid A., Velagapudi R., Vision T.J., Zeng Q.,
RA Zolan M.E., Pukkila P.J.;
RT "Insights into evolution of multicellular fungi from the assembled
RT chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus).";
RL Proc. Natl. Acad. Sci. U.S.A. 107:11889-11894(2010).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EFI28108.1}.
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DR EMBL; AACS02000003; EFI28108.1; -; Genomic_DNA.
DR RefSeq; XP_002911602.1; XM_002911556.1.
DR AlphaFoldDB; D6RLC0; -.
DR STRING; 240176.D6RLC0; -.
DR GeneID; 9379627; -.
DR KEGG; cci:CC1G_14135; -.
DR VEuPathDB; FungiDB:CC1G_14135; -.
DR eggNOG; KOG1343; Eukaryota.
DR HOGENOM; CLU_007727_4_3_1; -.
DR InParanoid; D6RLC0; -.
DR OMA; FVSPACY; -.
DR OrthoDB; 124800at2759; -.
DR Proteomes; UP000001861; Unassembled WGS sequence.
DR GO; GO:0000118; C:histone deacetylase complex; IEA:InterPro.
DR GO; GO:0004407; F:histone deacetylase activity; IEA:InterPro.
DR GO; GO:0010468; P:regulation of gene expression; IEA:UniProt.
DR Gene3D; 3.40.800.20; Histone deacetylase domain; 1.
DR InterPro; IPR019154; Arb2-like_domain.
DR InterPro; IPR000286; His_deacetylse.
DR InterPro; IPR023801; His_deacetylse_dom.
DR InterPro; IPR037138; His_deacetylse_dom_sf.
DR InterPro; IPR017320; Histone_deAcase_II_euk.
DR InterPro; IPR023696; Ureohydrolase_dom_sf.
DR PANTHER; PTHR45364:SF10; HISTONE DEACETYLASE; 1.
DR PANTHER; PTHR45364; HISTONE DEACETYLASE 9-RELATED; 1.
DR Pfam; PF09757; Arb2; 1.
DR Pfam; PF00850; Hist_deacetyl; 1.
DR PRINTS; PR01270; HDASUPER.
DR SUPFAM; SSF52768; Arginase/deacetylase; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000001861}.
FT DOMAIN 79..377
FT /note="Histone deacetylase"
FT /evidence="ECO:0000259|Pfam:PF00850"
FT DOMAIN 433..679
FT /note="Arb2-like"
FT /evidence="ECO:0000259|Pfam:PF09757"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 692 AA; 77293 MW; 082B78BC67ACE50E CRC64;
MSVSQLPQLD SMDVDNPLNV RGPSTSTNAD SNIAGPSNLT RYLPNGLPRA SSLPVSFGNL
SVGYVYSADM MQHFNEEGHP EQPARIKRIW DLLVAKGLTE KMRRIDIRKV KKEEAMLVHS
EDHWDKVIQL QYMDDQQRLD SAEYYERMSL YVMKGTTPAA LLSCGGVIEA SLAVARGLVQ
KSFAIVRPPG HHAEPDEHMG FCFFNNVAVA ARVVQQLTPL KKILILDWDV HHGNGTQRAF
DDDPSVLYMS IHRYESGHFY PCGPFGSLES CGKGPGEGFS VNVPWPRAGM EDADYLYAFQ
KVIMPIAMEF APDLVIISAG FDAADGDDLG ECHVTPKGYA HMTHMLAGLA GGKMVVALEG
GYNLDAISDS ALAVTEILLG QAPPQIDPMI ASEDATETVW LVAKHLSRYW KSLDPKACEP
REQVEEISYS IPEILKAHRQ HYLYTNHDMM EIPLMTAELD QRFSSQVMCT PDMLDNDTIV
LFVHEFGNLR IELESSATCD VNLHRSYLVD FSKELISWID TEQFALIDAN LFPKPTEIQQ
TRRATLESDL VREVILYLWD NYIQLSKASR VILIGHGPGC RAVAELLTRR ATGVMKLVTT
VIQIVGLQHS ACAPTGFEDI RTWYKSHSAI ILPDNHPMSS GRELAKEIRK HGRMIYVEET
QPLKLVMKAL PAVQQIIRES NPPRPDANGI ER
//