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Database: UniProt/TrEMBL
Entry: D7CQ62_TRURR
LinkDB: D7CQ62_TRURR
Original site: D7CQ62_TRURR 
ID   D7CQ62_TRURR            Unreviewed;       675 AA.
AC   D7CQ62;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   24-JAN-2024, entry version 63.
DE   RecName: Full=Beta-galactosidase {ECO:0000256|ARBA:ARBA00012756, ECO:0000256|PIRNR:PIRNR001084};
DE            Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};
DE            EC=3.2.1.23 {ECO:0000256|ARBA:ARBA00012756, ECO:0000256|PIRNR:PIRNR001084};
GN   OrderedLocusNames=Trad_1728 {ECO:0000313|EMBL:ADI14846.1};
OS   Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24).
OC   Bacteria; Deinococcota; Deinococci; Trueperales; Trueperaceae; Truepera.
OX   NCBI_TaxID=649638 {ECO:0000313|EMBL:ADI14846.1, ECO:0000313|Proteomes:UP000000379};
RN   [1] {ECO:0000313|Proteomes:UP000000379}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 17093 / CIP 108686 / LMG 22925 / RQ-24
RC   {ECO:0000313|Proteomes:UP000000379};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA   Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K.,
RA   Ovchinnikova G., Munk A.C., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D.,
RA   Tindall B., Pomrenke H.G., Brambilla E., Klenk H.-P., Eisen J.A.;
RT   "The complete genome of Truepera radiovictris DSM 17093.";
RL   Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADI14846.1, ECO:0000313|Proteomes:UP000000379}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 17093 / CIP 108686 / LMG 22925 / RQ-24
RC   {ECO:0000313|Proteomes:UP000000379};
RX   PubMed=21475591; DOI=10.4056/sigs.1563919;
RA   Ivanova N., Rohde C., Munk C., Nolan M., Lucas S., Del Rio T.G., Tice H.,
RA   Deshpande S., Cheng J.F., Tapia R., Han C., Goodwin L., Pitluck S.,
RA   Liolios K., Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K.,
RA   Land M., Hauser L., Chang Y.J., Jeffries C.D., Brambilla E., Rohde M.,
RA   Goker M., Tindall B.J., Woyke T., Bristow J., Eisen J.A., Markowitz V.,
RA   Hugenholtz P., Kyrpides N.C., Klenk H.P., Lapidus A.;
RT   "Complete genome sequence of Truepera radiovictrix type strain (RQ-24).";
RL   Stand. Genomic Sci. 4:91-99(2011).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Hydrolysis of terminal non-reducing beta-D-galactose residues
CC         in beta-D-galactosides.; EC=3.2.1.23;
CC         Evidence={ECO:0000256|ARBA:ARBA00001412,
CC         ECO:0000256|PIRNR:PIRNR001084};
CC   -!- SIMILARITY: Belongs to the glycosyl hydrolase 42 family.
CC       {ECO:0000256|ARBA:ARBA00005940, ECO:0000256|PIRNR:PIRNR001084}.
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DR   EMBL; CP002049; ADI14846.1; -; Genomic_DNA.
DR   RefSeq; WP_013178213.1; NC_014221.1.
DR   AlphaFoldDB; D7CQ62; -.
DR   SMR; D7CQ62; -.
DR   STRING; 649638.Trad_1728; -.
DR   CAZy; GH42; Glycoside Hydrolase Family 42.
DR   KEGG; tra:Trad_1728; -.
DR   eggNOG; COG1874; Bacteria.
DR   HOGENOM; CLU_012430_1_1_0; -.
DR   OMA; ANDHYLD; -.
DR   OrthoDB; 9800974at2; -.
DR   Proteomes; UP000000379; Chromosome.
DR   GO; GO:0009341; C:beta-galactosidase complex; IEA:InterPro.
DR   GO; GO:0004565; F:beta-galactosidase activity; IEA:UniProtKB-EC.
DR   GO; GO:0006012; P:galactose metabolic process; IEA:InterPro.
DR   CDD; cd03143; A4_beta-galactosidase_middle_domain; 1.
DR   Gene3D; 3.40.50.880; -; 1.
DR   Gene3D; 3.20.20.80; Glycosidases; 1.
DR   Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR   InterPro; IPR013739; Beta_galactosidase_C.
DR   InterPro; IPR013738; Beta_galactosidase_Trimer.
DR   InterPro; IPR029062; Class_I_gatase-like.
DR   InterPro; IPR003476; Glyco_hydro_42.
DR   InterPro; IPR013529; Glyco_hydro_42_N.
DR   InterPro; IPR013780; Glyco_hydro_b.
DR   InterPro; IPR017853; Glycoside_hydrolase_SF.
DR   PANTHER; PTHR36447; BETA-GALACTOSIDASE GANA; 1.
DR   PANTHER; PTHR36447:SF1; BETA-GALACTOSIDASE GANA; 1.
DR   Pfam; PF02449; Glyco_hydro_42; 1.
DR   Pfam; PF08533; Glyco_hydro_42C; 1.
DR   Pfam; PF08532; Glyco_hydro_42M; 1.
DR   PIRSF; PIRSF001084; B-galactosidase; 1.
DR   SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR   SUPFAM; SSF52317; Class I glutamine amidotransferase-like; 1.
PE   3: Inferred from homology;
KW   Glycosidase {ECO:0000256|PIRNR:PIRNR001084, ECO:0000313|EMBL:ADI14846.1};
KW   Hydrolase {ECO:0000256|PIRNR:PIRNR001084, ECO:0000313|EMBL:ADI14846.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000379}.
FT   DOMAIN          8..377
FT                   /note="Glycoside hydrolase family 42 N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF02449"
FT   DOMAIN          389..592
FT                   /note="Beta-galactosidase trimerisation"
FT                   /evidence="ECO:0000259|Pfam:PF08532"
FT   DOMAIN          601..652
FT                   /note="Beta-galactosidase C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF08533"
FT   ACT_SITE        144
FT                   /note="Proton donor"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR001084-1"
FT   ACT_SITE        300
FT                   /note="Nucleophile"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR001084-1"
FT   BINDING         105
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR001084-2"
FT   BINDING         143
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR001084-2"
FT   BINDING         308
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR001084-2"
SQ   SEQUENCE   675 AA;  74567 MW;  4F41264C001B4369 CRC64;
     MTIFYGGDYN PEQWPEATWH EDVTLMQEAG VNLVSVAIFA WSKLEPEPGR FDFGWLDRLL
     DLLHEHGIGV CLATATAAPP PWLAHQHPES LPVTATGVRL GVGSRQQYSP SSPAYKEAAA
     RLVRAIAERY KGHPALKLWH VNNEYGCHVY ESFDEDSAAA FRAWLRARYG TLEALNAAWG
     TAFWSQLYHH WEEITPPRAA PTFLNPTQQL DWRRFCSDAL LALYKMERDI LREVTPEVPI
     TTNFIGVHKP IDAWRWAEAL DLVANDAYPD PSDPEAPIHA AFASDVMRSL KGGAPWLLME
     QAPNQVQWRP RNALKAPGVM RLWSLQALAR GARGVMFFQW RQSKAGAEKF HSGMVPHGGT
     ETRTWHEVKA LGQELKGLGE LLESTLRSDV AVVLDWDTWW ALELDAKPSD GVRYLETLYA
     PYAELWRRNI GVTFVRPDAD LSPYKLVVAP NLYLVTDEAA ANLESYVRGG GVLVMGFFSG
     IVDEHDQVRL GGYPAPFRQL LGLRVEEFDA LPAGARLSVR LPAGDVSAET WADVIHLEGA
     EALGTFGAGF YAGGPAVTRH RFGRGVSFYI GTRLAAEGLA WVLAEACREA GVAPVLETPP
     GVEAVARTRG GARYLALFNH SDETVTVALP ERFTALGSGA LQEGTLELAA RDAVFLRARS
     ATHAQEPAER ERSPV
//
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