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Database: UniProt/TrEMBL
Entry: D7D8M2_STAHD
LinkDB: D7D8M2_STAHD
Original site: D7D8M2_STAHD 
ID   D7D8M2_STAHD            Unreviewed;       381 AA.
AC   D7D8M2;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   24-JAN-2024, entry version 53.
DE   SubName: Full=ATP dependent DNA ligase {ECO:0000313|EMBL:ADI32118.1};
GN   OrderedLocusNames=Shell_1013 {ECO:0000313|EMBL:ADI32118.1};
OS   Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 /
OS   P8).
OC   Archaea; Thermoproteota; Thermoprotei; Desulfurococcales;
OC   Desulfurococcaceae; Staphylothermus.
OX   NCBI_TaxID=591019 {ECO:0000313|EMBL:ADI32118.1, ECO:0000313|Proteomes:UP000002573};
RN   [1] {ECO:0000313|Proteomes:UP000002573}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8
RC   {ECO:0000313|Proteomes:UP000002573};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Larimer F.,
RA   Land M., Hauser L., Kyrpides N., Mikhailova N., Anderson I.J., Woyke T.;
RT   "Complete sequence of Staphylothermus hellenicus DSM 12710.";
RL   Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADI32118.1, ECO:0000313|Proteomes:UP000002573}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8
RC   {ECO:0000313|Proteomes:UP000002573};
RX   PubMed=22180806; DOI=10.4056/sigs.2054696;
RA   Anderson I., Wirth R., Lucas S., Copeland A., Lapidus A., Cheng J.F.,
RA   Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Pati A., Mikhailova N., Woyke T., Klenk H.P.,
RA   Kyrpides N., Ivanova N.;
RT   "Complete genome sequence of Staphylothermus hellenicus P8.";
RL   Stand. Genomic Sci. 5:12-20(2011).
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DR   EMBL; CP002051; ADI32118.1; -; Genomic_DNA.
DR   RefSeq; WP_013143316.1; NC_014205.1.
DR   AlphaFoldDB; D7D8M2; -.
DR   STRING; 591019.Shell_1013; -.
DR   GeneID; 9234302; -.
DR   KEGG; shc:Shell_1013; -.
DR   eggNOG; arCOG04218; Archaea.
DR   HOGENOM; CLU_061502_0_0_2; -.
DR   OMA; EMAGPES; -.
DR   OrthoDB; 14524at2157; -.
DR   Proteomes; UP000002573; Chromosome.
DR   GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR   CDD; cd07894; Adenylation_RNA_ligase; 1.
DR   Gene3D; 3.10.450.740; -; 1.
DR   Gene3D; 3.30.1490.70; -; 1.
DR   Gene3D; 3.30.70.2160; -; 1.
DR   Gene3D; 3.30.470.30; DNA ligase/mRNA capping enzyme; 1.
DR   InterPro; IPR041596; Lig_Pab1020_C.
DR   InterPro; IPR021122; RNA_ligase_dom_REL/Rnl2.
DR   InterPro; IPR001072; RNA_ligase_Pab1020.
DR   NCBIfam; TIGR01209; RNA ligase; 1.
DR   Pfam; PF18330; Lig_C; 1.
DR   Pfam; PF09414; RNA_ligase; 1.
DR   PRINTS; PR01048; Y414FAMILY.
DR   SUPFAM; SSF56091; DNA ligase/mRNA capping enzyme, catalytic domain; 1.
PE   4: Predicted;
KW   Ligase {ECO:0000313|EMBL:ADI32118.1}.
FT   DOMAIN          86..241
FT                   /note="RNA ligase"
FT                   /evidence="ECO:0000259|Pfam:PF09414"
FT   DOMAIN          255..373
FT                   /note="RNA ligase Pab1020 C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF18330"
SQ   SEQUENCE   381 AA;  44448 MW;  D74D0D9A88208DB2 CRC64;
     MDENELINNL SKALGIEYEK LSKHIGRSIR LMKYGELNYA VLRRDLLGYR EGTTILLGDE
     PLIVHGYPSI QRLAFIEGVS KHMIDNVVVE EKMNGYNVRI VYYMGNIYAI TRGGYICPYT
     TARIRKLYFK NIKLAHQEYP DIVLVGEVVG TENPYVVYDY PEARGFDYFI FDTMKKDKLQ
     PLKIRDEIAE KYSLKAVRVL DIIDKKDIDG LKSIIDRLEK ERREGVVLKD PYHRVPPLKY
     TTIYINIRDI WEGMRHPFDE GRGYLFSRIV RLIAQGYEYD WNNAELDRIA LKLGRAILEP
     AINSLRKRAN GEIIASKYTL VFPSEDDLSK YIEYAESIGM DFIFRVVEKR EDGCIVVELF
     KMKETHNIYT KMLKTGYSPL D
//
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