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Database: UniProt/TrEMBL
Entry: D7LG19_ARALL
LinkDB: D7LG19_ARALL
Original site: D7LG19_ARALL 
ID   D7LG19_ARALL            Unreviewed;      1367 AA.
AC   D7LG19;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   24-JAN-2024, entry version 70.
DE   SubName: Full=Nucleic acid binding protein {ECO:0000313|EMBL:EFH54958.1};
GN   ORFNames=ARALYDRAFT_481235 {ECO:0000313|EMBL:EFH54958.1};
OS   Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN   [1] {ECO:0000313|Proteomes:UP000008694}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX   PubMed=21478890; DOI=10.1038/ng.807;
RA   Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA   Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA   Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA   Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA   Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA   Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT   "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT   change.";
RL   Nat. Genet. 43:476-481(2011).
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DR   EMBL; GL348716; EFH54958.1; -; Genomic_DNA.
DR   RefSeq; XP_002878699.1; XM_002878653.1.
DR   STRING; 81972.D7LG19; -.
DR   EnsemblPlants; fgenesh2_kg.4__295__AT2G23740.1; fgenesh2_kg.4__295__AT2G23740.1; fgenesh2_kg.4__295__AT2G23740.1.
DR   Gramene; fgenesh2_kg.4__295__AT2G23740.1; fgenesh2_kg.4__295__AT2G23740.1; fgenesh2_kg.4__295__AT2G23740.1.
DR   eggNOG; KOG1082; Eukaryota.
DR   eggNOG; KOG1721; Eukaryota.
DR   HOGENOM; CLU_004911_0_0_1; -.
DR   Proteomes; UP000008694; Unassembled WGS sequence.
DR   GO; GO:0005694; C:chromosome; IEA:UniProtKB-KW.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0140938; F:histone H3 methyltransferase activity; IEA:EnsemblPlants.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:EnsemblPlants.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0045814; P:negative regulation of gene expression, epigenetic; IEA:EnsemblPlants.
DR   GO; GO:1900109; P:regulation of histone H3-K9 dimethylation; IEA:EnsemblPlants.
DR   Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR   Gene3D; 2.170.270.10; SET domain; 1.
DR   InterPro; IPR003616; Post-SET_dom.
DR   InterPro; IPR007728; Pre-SET_dom.
DR   InterPro; IPR001214; SET_dom.
DR   InterPro; IPR046341; SET_dom_sf.
DR   InterPro; IPR040689; SUVR5_Znf-C2H2_3rpt.
DR   InterPro; IPR013087; Znf_C2H2_type.
DR   PANTHER; PTHR47325; HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5; 1.
DR   PANTHER; PTHR47325:SF1; HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5; 1.
DR   Pfam; PF05033; Pre-SET; 1.
DR   Pfam; PF00856; SET; 1.
DR   Pfam; PF18868; zf-C2H2_3rep; 1.
DR   SMART; SM00508; PostSET; 1.
DR   SMART; SM00468; PreSET; 1.
DR   SMART; SM00317; SET; 1.
DR   SMART; SM00355; ZnF_C2H2; 3.
DR   SUPFAM; SSF82199; SET domain; 1.
DR   PROSITE; PS50868; POST_SET; 1.
DR   PROSITE; PS50867; PRE_SET; 1.
DR   PROSITE; PS50280; SET; 1.
DR   PROSITE; PS00028; ZINC_FINGER_C2H2_1; 2.
DR   PROSITE; PS50157; ZINC_FINGER_C2H2_2; 2.
PE   4: Predicted;
KW   Chromosome {ECO:0000256|ARBA:ARBA00022454};
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW   S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT   DOMAIN          756..784
FT                   /note="C2H2-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50157"
FT   DOMAIN          825..853
FT                   /note="C2H2-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50157"
FT   DOMAIN          1130..1206
FT                   /note="Pre-SET"
FT                   /evidence="ECO:0000259|PROSITE:PS50867"
FT   DOMAIN          1209..1341
FT                   /note="SET"
FT                   /evidence="ECO:0000259|PROSITE:PS50280"
FT   DOMAIN          1351..1367
FT                   /note="Post-SET"
FT                   /evidence="ECO:0000259|PROSITE:PS50868"
FT   REGION          902..927
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        905..922
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1367 AA;  153889 MW;  022294263E03F22C CRC64;
     MDELVLDVDV EEATGSELLV KPEPGDDLNE VNRSTDLVTV ITGPIGNNGK GESSPSEPKW
     LQQDEPIALW VKWRGKWQAG IRCAKADWPL TTLRGKPTHD RKKYCVIFFP HTKNYSWADM
     QLVRSINEFP DPIAYKSHKI GIKLVKDLTA ARRYIMRKLT VGIFNIVDQF PSEVVSEAAR
     DIIIWREFAM EATRSTSYHD LGIMLVKLHS MILQRYMDPI WLENSFPLWV QKCNNAVNAE
     SIELLNEWSE VKSLSESPMQ PMLFSEWKTW KHDIAKWFSI SRRGVGEIAQ PNSKSVFNSD
     VQASRKRPKL EIRRAETTNA SQMESDTSPQ GLTAIDSEFF SSRGNTNTPE ALKDENPIMN
     TPENGLDLWD GIVVEAGGSQ IMKTKETNGL SHPHINESVL KKPFGSGNKS QQCIAFIESK
     GRQCVRWANE GDVYCCVHLA SRFTTKSAKN EGSPAVEAPM CGGVTVLGTK CKHRSLPGFL
     YCKKHRPHTE MEKPDDSSSL LVKRKVAEIM STLETNQCQD LVPFGEPEGL SFEKQEPHGA
     TSFTEMFEHC SQEDNLCIGS CSENSYIPCS EFSTKHSLYC EQHLPNWLKR ARNGKSRIIS
     KEVFVDLLRG CLSREEKLAL HQACDIFYKL FKSVLSLRNS VPMEVQIDWA KAEASRNADV
     GVGEFLMKLV SNERERLTRI WGFATGADEE DVSLSEYPNR LLAITNAWAN DEDKEKWSFS
     GFACAICLDS FVKRKLLEIH VEERHHVQFA EKCMLLQCIP CGSHFGDKEQ LLLHVQAVHP
     SECKSITVAP ECNLTNGESS QKPDAGSSQI VVSQNNENTS GVHKFVCKFC GLKFNLLPDL
     GRHHQAEHMG PSLVGSRGPK KGIRFNTYRM KSGRLSRPNK FKKSLGAVSY RIRNRAGVNM
     KRRMQGSKPL STEGNTGVSP PPPGDSRNFD GTDAHCSVVS NILLSKVQKA KHRPNNFDIL
     SAARSACCRV SLETSLEAKF GDLPDRIYLK AAKLCGEQGV QVQWHQEGYI CSNGCKPVKD
     PNLLRPLIPR QENDRFGISM DPVQHSNIEL EVDECHCIME AHHFSKRPFG NTAVLCKDIS
     FGKESVPICV VDDDLLNSGK PYERPWESFT YVTNSILHPS MELVKENLQL RCGCRSSVCS
     PVTCDHVYLF GNDFEDARDI YGKSMRFRFP YDGKQRIILE EGYPVYECNK FCGCSRTCQN
     RVLQNGIRVK LEVFRTESKG WGLRACEHIL RGTFVCEYIG EVLDQQEANK RRNQYGKEGC
     SYILDIDANI NDIGRLMEEE PDYAIDATTH GNISRFINHS CSPNLVNHQV IVESMESPLA
     HIGLYASMDV AAGEEITRDY GCRPVPSGQE NEHPCHCKAT NCRGLLS
//
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