ID   D8IA88_BRAP9            Unreviewed;      5567 AA.
AC   D8IA88;
DT   05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT   05-OCT-2010, sequence version 1.
DT   27-MAR-2024, entry version 57.
DE   SubName: Full=DNA-directed RNA polymerase, omega subunit family protein-like protein {ECO:0000313|EMBL:ADK32218.1};
GN   OrderedLocusNames=BP951000_2245 {ECO:0000313|EMBL:ADK32218.1};
OS   Brachyspira pilosicoli (strain ATCC BAA-1826 / 95/1000).
OC   Bacteria; Spirochaetota; Spirochaetia; Brachyspirales; Brachyspiraceae;
OC   Brachyspira.
OX   NCBI_TaxID=759914 {ECO:0000313|EMBL:ADK32218.1, ECO:0000313|Proteomes:UP000000332};
RN   [1] {ECO:0000313|EMBL:ADK32218.1, ECO:0000313|Proteomes:UP000000332}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-1826 / 95/1000 {ECO:0000313|Proteomes:UP000000332};
RX   PubMed=20625514; DOI=10.1371/journal.pone.0011455;
RA   Wanchanthuek P., Bellgard M.I., La T., Ryan K., Moolhuijzen P., Chapman B.,
RA   Black M., Schibeci D., Hunter A., Barrero R., Phillips N.D., Hampson D.J.;
RT   "The complete genome sequence of the pathogenic intestinal spirochete
RT   Brachyspira pilosicoli and comparison with other Brachyspira genomes.";
RL   PLoS ONE 5:E11455-E11455(2010).
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DR   EMBL; CP002025; ADK32218.1; -; Genomic_DNA.
DR   STRING; 759914.BP951000_2245; -.
DR   KEGG; bpo:BP951000_2245; -.
DR   eggNOG; COG1196; Bacteria.
DR   HOGENOM; CLU_223195_0_0_12; -.
DR   InParanoid; D8IA88; -.
DR   Proteomes; UP000000332; Chromosome.
DR   GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR   GO; GO:0005576; C:extracellular region; IEA:InterPro.
DR   GO; GO:0008289; F:lipid binding; IEA:InterPro.
DR   GO; GO:0006869; P:lipid transport; IEA:InterPro.
DR   GO; GO:0042157; P:lipoprotein metabolic process; IEA:InterPro.
DR   Gene3D; 1.10.287.1490; -; 1.
DR   Gene3D; 1.20.120.20; Apolipoprotein; 5.
DR   Gene3D; 1.20.5.1230; Apolipoprotein A-I; 1.
DR   Gene3D; 1.10.287.950; Methyl-accepting chemotaxis protein; 1.
DR   InterPro; IPR000074; ApoA_E.
DR   PANTHER; PTHR45615:SF40; MYOSIN HEAVY CHAIN, MUSCLE-RELATED; 1.
DR   PANTHER; PTHR45615; MYOSIN HEAVY CHAIN, NON-MUSCLE; 1.
DR   Pfam; PF01442; Apolipoprotein; 13.
DR   SUPFAM; SSF58113; Apolipoprotein A-I; 6.
DR   SUPFAM; SSF58100; Bacterial hemolysins; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   DNA-directed RNA polymerase {ECO:0000313|EMBL:ADK32218.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000332};
KW   Transcription {ECO:0000313|EMBL:ADK32218.1}.
FT   COILED          66..148
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          249..283
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          311..356
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          522..589
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          620..669
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          744..851
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          910..962
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          1007..1034
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          1058..1096
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          1127..1154
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          1315..1342
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          1388..1445
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          1586..1628
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          1743..1774
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          1930..1957
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          2004..2121
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          2150..2233
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          2278..2499
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          2655..2682
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          2729..2853
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          2882..2951
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          2996..3244
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          3271..3354
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          3400..3467
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          3565..3655
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          3715..3742
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          3825..3852
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          3965..4099
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          4612..4672
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          4829..4856
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          4910..5103
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          5149..5176
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          5311..5338
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          5439..5476
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   5567 AA;  648753 MW;  A139DA3B591C6DE4 CRC64;
     MLIIPIIVVG ISKIIDRKKN NNNSNYDDIF AEEKAALEGI IEEKISEVRD NAIDLEIAVK
     KAGFISKSME EDLAKLNNKI ESYKDYKAAV SQYQEQVDSL EEAYLDILNK VDTVLKERNT
     IEKTYKRISD VKTKMIELEK NVSSIQDNLI ASYNAKLNDF ESELYKRFDA LTTNLLARDA
     HYTDMAEQEK DKISALTEEF KLHVAKKEEL FTNQLTQLAE RTARNNIEQL AELFEKGRDE
     LINKYSLFAE EINSKSKDIE ERYASLSQSK EGLEVELINL RDTIQERLNS ITESSVEEFK
     GEMEKTKEFL YNTLKEELEK IGNEKEEFLE SVEDKAHSLE KTIDDIKDKA ELITKDYEDK
     TVQLETEFTT LKNDISNRLI TEVEAFSNNI RNILENENDG VITLYRNKTK ELSDLIVSID
     GMSEETMLRA ESKFDEIVND IERLKNDILA RTQDDMEYSI DNARSSLIAE INELRADVET
     ETNILKDKMN EIHYQTSEIS SILTNKQEEI LDALSLEKEY LYKDLEEQAN KKIQELEDNF
     NNIKSDFEIG VDNYIKNTYT DLNNVTEKLS VLKEQYDNDS NKIQDLLKDT EINLKENIEK
     RIELLDKTSS EIKDLVDSAN EKLDTGIKNA ESNIEEIRNN LYEYGNSYLD SLKSQLKEVL
     DNYEETSMKS ISDSINSLVH QVEESDKRHN DIVSNMEDSL KEFKDKIDYS LNENKEFAED
     NKNKIVNMLN TELLEATNSF DALLNEKREG INKVRDDIED ILNKVENGRE DFENTINRVY
     DVANEKESNL LSNIEDKYKS LNDKIDDLFS ESKSDLDSMT KEYKGSLENY YNNLRNEYEQ
     LKEHSDIISD EYRIKMDTLS SKLEELAFAS KNMEDSIENK TKDITDYVNS VKENVDAKSN
     EVVSSVNSII EDIETKKENI NKYVDELKSN IDDKLDITDS YVNELRENID NIEKNSDEYL
     SALKDVVDDR LETVDSYVNE FKSNIDSKEK DSNYYIDALK NNIDDRLETA DSYVNDLKDN
     IDSLKKAVNT EMQNVSSYIE ERKEFLNAKC DEAFNSVEEE ASNKLDELNE IIEAAIEKYN
     DEIKEIESVR LEENANIIAD VENIGANIRK DYKKYTKILE EIYNNKKTSL DDYANELKND
     IEKHREDAEK IHLENEANYI DDYLKTKSLE IDEKVNNINT TLNDSFNTLY NGVTELLEKA
     KEYTDSAVSN QTLELSKALE LLRDGFNSYK DGLDSKLKEE IDNMISNNEN MLSMFNEYNE
     KIERINDISN LVDSLKDDIY NELEELKSDV SFKNTEFDRT IDEIKSSIMS REELNDIQES
     EREALNVQLD DMKEEFEIFK SQILKSNEVE IPALLEEERE RIENIFDEFS KNLLMRISDN
     ESDLSYIKDV LSEERNHLIE KIELIEKDLE DIKTDNRVDA LVEDKLQLET SLDDLKSDIE
     KVKNLEKDFI SLKDRMEGID STIKDDVASL SSKLIDFKDN LEEKISNDSS SLLEDLETLN
     KELYDIKGNL SNSIDKTDNI ENRMENILKE LSSGNEEFKN RIEKRIEYFE DSWSDPTKIR
     SMYANEIKEE INNLRAYSDE KFDVYINELK SQIDEISSGI EDWKNENINE LLSQLNDAKN
     SIESYIKDTD SKKEELLSDI LKKLEAKEGE IYSRIDEKII DVDNKLSAID KKINDDIGSS
     LENIYKMIND ASNKYNEEIK NIEHHRSNEK EAIISDLKSL SDSIRADYEE YSIMLDNAYN
     TAVSALDEHL DNVKKEIENI KDESETELLN NEKNYINEYL EEYSNNLDSR LEEKLLVLEE
     SKKELDNILN SSFENLNNRI EESLSKVNSL AEEKLISIEK DINDKLLVNV EKLSKLEEDF
     GKLFNKDYVE ELDLRINSIN SKLEEEISNI RNSLDNDISS VRSQYKELSV DFEEALDLVK
     KSILDRDEVI DLQSKEKDEL ISQLESLRDD YLSLKGDVSS VSDNNELYSL FEEEREKLER
     GFEEFSSELL NRLNDTDSDI NYIKDMLSSD KNLLLEELDA LRLEVENVHN DERLNELLDY
     KLSLEDSFNG IREELSKFDE LESSLNELRG SVSELEGSFN NSLEELKDNV GRQLEGYNVN
     LNNLNSDINR LSNSVEDITS NNENISTNLD TISSNFEVLN NNFESVNGNV NDFNNRLSSF
     KEDIDKAINK SLELENSISN YRKDLEDKLS GITNNINSLS NDSSVKDLFN EELSKLNNLF
     DNLEKDNKEF RDRLERRVEY FEDTWSDSSR IRSLYSAELR EELENIKYER ELEFENYLEE
     LRAKVDNLSS SVDNYKEGDI NRLLSELEQA KNGIESYIKD TDSKKEELLS SIMNELELKE
     KAIHDRLEES KSNIDSYIKD ADIKKEEFLS SMMNELESKE KAIYDRLEDR VKDIENKLSM
     LDNKVSNEVS RDLENFYNSL NEAVNNYKAE INTIEANSAE LSTDAINRIS EEIKNSYENY
     VRDLEEVYNN SVSLLEEYSN NLKDELDSLK EENTEADKNY INEYLEEYSN NLDSRLEEKL
     LVLEESKKEL DNILNSSFEN LNSRIEESLS KVNSLAEERI SSLEKDINDK LLANVDKLSK
     LEEDFGKLFN KDYVEELDSR INSINSKLEE EISNIRNSLD NDISSVRSQY KELSVDFEEA
     LDLVKKSILD RDEVIDLQSK EKDELISQLE SLRDDYLSLK GDVSSVSDNN ELYSLFEEER
     EKLERGFEEF SSELLNRLND TDSDINYIKD MLSSDKNLLL EELDALRLEV ENVHNDERLN
     ELLDYKLSLE DSFNGIREEL SKFDELESSL NELRDSVSEL DGSLLSSINA SIDELKKEYN
     DVHLEIDKLN GSIEELSLNN ENISANLDTI SSNFEVLNNN FESVNGNVND FDNRLSSFKE
     DVDKAINKSL ELENSISNYR KDLEDKLSGI TNNINSLSND SSVKDLFNEE LSKLNDLFDN
     LEKDNKEFRD RLERRVEYFE DTWSDSARIR SLYSSDLREE LENIKYEREL EFENYLEELR
     AKVDNLSSSV DNYKEGDINR LLSELEQAKN SIESYIKDTD SKKEELLSSI MNELESKEKA
     IYDRLEDRVK DIENKLSVFD DKISNEVSRD LENFYNSLNE AVNNYKAEIN TIEANSAELS
     ADTLNKISEE VKNSYENYVK DLEEVYNNSV SLLEEYSNNL KNELDSLKEE NTEADKNYIN
     EYLEEYSNNL KDELENLKEE NAESQKNYID EYLQEYLNNI DSKLEDKLDI LNKAKEELDN
     IIKASFDELN SNLNDTINKI NENTLNQNER ISIVESKLND YAEQISKLDD KEKLFYEYID
     SKISELKEEY EALNKSFEDK FLSIESAVLS DEHVEALREE FANFKDTILE AKKSDIPSIF
     EELKSQFEES FDMFTKEIFN RVSDSESMIS NIKNTMEDEK NTILDKIDNF KFELEALKNN
     DTLNELEEER IKLEDTFNSL KEDFNKLDEL ENEVYFLKNN LEGVDGNLRI DVDRLFEEIS
     EFKYSLEYKI DTLEDNTVSK EYFDEEKEKL YSLYDELNSS NDEFRDNINN RVAYFEDNLS
     DPSKILKLYE DAITPEVNNL KNEIISNLKE QIDEVENGIS IWKDDSLYNL LEQLKEAKNN
     IESFIDSTND KKESIVDDIV KAVREKIEDR ENELNESLES RIDSINDKVS DLESKLTSDI
     NRFNNIITDA IDKYEDELKN IESYRLEESS SIMKDIDDVG KNIISNYESY AKLLNTAYEN
     NSKSLEELCN NLKLEIEKAK LDANRGYIDV YLNDYSSKID AKLKEQMDSI EKSKESLDNI
     ITDSLSDLNE NINNTISKAL ESSESKINDF INSKELELVN KISSYEDNTI SKDELSEELK
     KIEESFELFK SNNNDIFSTL EEYKTKISSI VDSLSDIEDN NLNFTSRLEK RIEFFEDSWG
     DGDKIKELYS DFIAEKADSF KSDLEVKFRD SFEEFNLKID NVEKNFADSI NSIIESLDKE
     NLTSNERLES ISNTINNLKS DLENKIVSIE EANDKSKLFI DDKLSIFENK MEAFEDRIKD
     VEDSQHYLNN DITQYVNRLD KVLNDYEEAI DTKINNLKNS LSNESGHVEH NLISSLELSN
     ELAKDKKELL DSIHELKKDV YETIERKDAQ MNEEFSKFKT EIIESIPSME DISDLFVSEK
     NNIVNEFEGF KNEILTSNNK NFADMFEEEK NKLIEELDNF KSAIRVEYMS NSDKIDAFKN
     EYLKNFNEII DKEKANLYYA LNDIRKEFES LKDNSVPLDK FEELISEYKG SIDNSIDDTK
     EKLSSNIADK DYVSKLFDEE IANINKTIEE FRKDLEENYS PTDVIAEILS KEQVDFENKL
     SSLKESILKD IPTLEDISNI FVEEKMSLRE EFASFRDDIE SKISEEGHFE NIEEQYKLDM
     KNNFAMLQEE VVGNINSYRD NMVNDISNFR DEFANKLSFI EELANSLLQE RERIALEVED
     IRLKYETGTL YSDDAINTIE SDRNKLINEF INFRKTILEL IREQDEAMKV LNNEKMSIID
     NIDELNKKVS LDLISKDDAI SLIDEQKKEI LDVLENFKGD SIEADFKYMT EELRDDIIKV
     FEESNEAFRK RIEARIEHFE DAYSEPEKIK EFYRDAIDAE VDNIKESASH ILLDITDNVE
     KVKKHIDDIE NEKVKSIIER IDNAQSEIDA IVDTIKVNLK EQENEIRLLS QSQKLISQDI
     ENVRKEREAL IEMVKTSDVN INNKIDSLTS AVIEASDNAA ERIAEKELEF NRKIKEVEEY
     IASMEEKIIN ENNEHLDKSK EAVNNLLASF NESILKETND LTPHIMKIVN EFVNNEMKKF
     ERFNDVKQAI DEVELSINDK IDDTFKLMNS KLDDTAKELR DNMSSYQDEL LSELRNAVNS
     ESERSIEEVK AMHEEELTKL KDMYLETEKY YSDRQERSKE DIVALFENTY KEWQDKINSL
     YSELESTKES MHSSVDNLLD DLEKAIDAKE EFNKSLEDNK EKLKDVEEKM NNLQNEFSPS
     IEKLQAIVEE KALELQNKIE LYSKDIEEEG NKFKSRLEEL SSNAKTSLDS KVVEFDSIID
     NVANRINELL EDKNNQFDEL RTQYEDISIS LLELRESISD AVNEKIKEAN SIIEENITNI
     EESANDKYDK YIDRLNSNME QTLSLLMNDA KEYVQNAKEE MLKVQSSNLD VYDERLAGMK
     NIISALEDDI AKYSSEIDAR LEDINLKYED KTNVILKDLD SRTDSLTEKL NDVVNSIDKM
     LDDKTYDINS EYETLKIQIE KIGKDIDKYM NTVKVFDKAE EMANFIKDDV AKLDVLVNDT
     KNTVYDMNKT MSEFEELKNM HNTILDYAES IRKEKESLKD TQEKVNMLVE MSEEVQNKFI
     QIAESNSMIE NTQEGIKVVI DIASQIENKL AIINDKEEQA NTILEKVNIA DNESDDILQR
     IDTIKSAMLD IEDTRREFSD KMFALDREMA KIDKNDEKVQ KFFSKLEELN VIIEEIQNQR
     ENLKYMKKQY EDYDNNIVKN LERAEYFVRY LETLLDNAEK YVNDAGKSLT KRSKTATTKI
     NDKKENIIIN MYKQGWKYDE IVKNTSYDRD EVERVIKKWK DESARGY
//