GenomeNet

Database: UniProt/TrEMBL
Entry: D8UIX3_VOLCA
LinkDB: D8UIX3_VOLCA
Original site: D8UIX3_VOLCA 
e; OGLUM06G01240.1; OGLUM06G01240.1; OGLUM06G01240.
DR   OrthoDB; EOG09360PTI; -.
DR   Proteomes; UP000026961; Chromosome 6.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000026961};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000026961};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     27     49       Helical. {ECO:0000256|SAM:Phobius}.
SQ   SEQUENCE   214 AA;  23295 MW;  D33F1ED148AB7B45 CRC64;
     MRNEKKEAAE EEEEEEKKFR WLDVVRYAAA GVVALLAVGV LVGAIVVVLR PDALVMKVIH
     GSMLVNLPPP SMTFTFQLEV DNPSGRDTMS FTDMSVAVLA VSVSGGGEIS MANLFDLPNI
     TDLQPGKVMQ VVTTQWTANP EAEVGDYFVR RLSRGETMAV TLRVQGILIT RLDTLNGDGP
     VHTSMANVTY TCFNVKLGVD KSLDSTDDVS CTRK
//
ID   A0A0E0A4W7_9ORYZ        Unreviewed;       448 AA.
AC   A0A0E0A4W7;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   06-JUL-2016, entry version 9.
DE   RecName: Full=Pectate lyase {ECO:0000256|RuleBase:RU361123};
DE            EC=4.2.2.2 {ECO:0000256|RuleBase:RU361123};
OS   Oryza glumipatula.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=40148 {ECO:0000313|EnsemblPlants:OGLUM06G02910.2, ECO:0000313|Proteomes:UP000026961};
RN   [1] {ECO:0000313|EnsemblPlants:OGLUM06G02910.2, ECO:0000313|Proteomes:UP000026961}
RP   NUCLEOTIDE SEQUENCE.
RA   Wing R.A., Panaud O., Oliveira A.C.;
RT   "Oryza genome evolution.";
RL   Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:OGLUM06G02910.2}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
CC   -!- CATALYTIC ACTIVITY: Eliminative cleavage of (1->4)-alpha-D-
CC       galacturonan to give oligosaccharides with 4-deoxy-alpha-D-galact-
CC       4-enuronosyl groups at their non-reducing ends.
CC       {ECO:0000256|RuleBase:RU361123}.
CC   -!- COFACTOR:
CC       Name=Ca(2+); Xref=ChEBI:CHEBI:29108;
CC         Evidence={ECO:0000256|RuleBase:RU361123};
CC       Note=Binds 1 Ca(2+) ion. Required for its activity.
CC       {ECO:0000256|RuleBase:RU361123};
CC   -!- PATHWAY: Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-
CC       D-gluconate from pectin: step 2/5.
CC       {ECO:0000256|RuleBase:RU361123}.
CC   -!- SIMILARITY: Belongs to the polysaccharide lyase 1 family.
CC       {ECO:0000256|RuleBase:RU361123}.
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DR   EnsemblPlants; OGLUM06G02910.2; OGLUM06G02910.2; OGLUM06G02910.
DR   Gramene; OGLUM06G02910.2; OGLUM06G02910.2; OGLUM06G02910.
DR   UniPathway; UPA00545; UER00824.
DR   Proteomes; UP000026961; Chromosome 6.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0030570; F:pectate lyase activity; IEA:UniProtKB-EC.
DR   GO; GO:0045490; P:pectin catabolic process; IEA:UniProtKB-UniPathway.
DR   Gene3D; 2.160.20.10; -; 1.
DR   InterPro; IPR002022; Amb_allergen_dom.
DR   InterPro; IPR018082; AmbAllergen.
DR   InterPro; IPR007524; Pec_lyase_N.
DR   InterPro; IPR012334; Pectin_lyas_fold.
DR   InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR   Pfam; PF00544; Pec_lyase_C; 1.
DR   Pfam; PF04431; Pec_lyase_N; 1.
DR   PRINTS; PR00807; AMBALLERGEN.
DR   SMART; SM00656; Amb_all; 1.
DR   SUPFAM; SSF51126; SSF51126; 1.
PE   3: Inferred from homology;
KW   Calcium {ECO:0000256|RuleBase:RU361123};
KW   Complete proteome {ECO:0000313|Proteomes:UP000026961};
KW   Lyase {ECO:0000256|RuleBase:RU361123};
KW   Metal-binding {ECO:0000256|RuleBase:RU361123};
KW   Reference proteome {ECO:0000313|Proteomes:UP000026961}.
FT   DOMAIN      175    371       Amb_all. {ECO:0000259|SMART:SM00656}.
SQ   SEQUENCE   448 AA;  50226 MW;  87ABB223FD53CF78 CRC64;
     MAGSVVTRSP LCSILFYVLA TAAAATATAT LVGNITADEE YWAKRSEVAR SFNRAAYVSD
     PVAVLNRFNE DVLNTTTATA AAARRSLMRR YRRRGPCTVT NPIDRCWRCR KNWASRRKRL
     AKCAMGFGRK ATGGLAGKIY IVTDAGDEHL VIPRRGTLRH AVIQERPLWI VFARSMVIRL
     AKELIVTSDK TIDGRGAQVH VTGAQITVQA VSNVIIHNLH IHNSVPRSGG LIRDSKHHFG
     IRGESDGDGI SVMGSSNIWI DHVSMSNCSD GLIDITDGST AITISNSHFT KHDHVMLFGA
     RDDSPKDKIM QVTLAFNHFG KGLVQRMPRC RFGFFHMVNN DYTHWLMYAI GGNMNPTIIS
     QGNRFRASDD MKLKEVTKRE YTSYDEYKEW VWKSQDDLFL NGAFFNESGG RNELRYNRLD
     LIQARNGRYV GRMTRFAGTL PCRVGKKC
//
ID   A0A0E0A7C6_9ORYZ        Unreviewed;       409 AA.
AC   A0A0E0A7C6;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   17-FEB-2016, entry version 8.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:OGLUM06G09450.3};
OS   Oryza glumipatula.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; O
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