GenomeNet

Database: UniProt/TrEMBL
Entry: E3D837_GARV3
LinkDB: E3D837_GARV3
Original site: E3D837_GARV3 
ID   E3D837_GARV3            Unreviewed;       907 AA.
AC   E3D837;
DT   11-JAN-2011, integrated into UniProtKB/TrEMBL.
DT   11-JAN-2011, sequence version 1.
DT   07-JUN-2017, entry version 40.
DE   SubName: Full=BNR/Asp-box repeat protein {ECO:0000313|EMBL:ADP38272.1};
GN   OrderedLocusNames=HMPREF0421_20186 {ECO:0000313|EMBL:ADP38272.1};
OS   Gardnerella vaginalis (strain ATCC 14019 / 317).
OC   Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae;
OC   Gardnerella.
OX   NCBI_TaxID=525284 {ECO:0000313|EMBL:ADP38272.1, ECO:0000313|Proteomes:UP000001453};
RN   [1] {ECO:0000313|EMBL:ADP38272.1, ECO:0000313|Proteomes:UP000001453}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 14019 / 317 {ECO:0000313|Proteomes:UP000001453};
RX   PubMed=20865041; DOI=10.1371/journal.pone.0012411;
RA   Yeoman C.J., Yildirim S., Thomas S.M., Durkin A.S., Torralba M.,
RA   Sutton G., Buhay C.J., Ding Y., Dugan-Rocha S.P., Muzny D.M., Qin X.,
RA   Gibbs R.A., Leigh S.R., Stumpf R., White B.A., Highlander S.K.,
RA   Nelson K.E., Wilson B.A.;
RT   "Comparative genomics of Gardnerella vaginalis strains reveals
RT   substantial differences in metabolic and virulence potential.";
RL   PLoS ONE 5:E12411-E12411(2010).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP002104; ADP38272.1; -; Genomic_DNA.
DR   RefSeq; WP_013399386.1; NC_014644.1.
DR   RefSeq; YP_003985295.1; NC_014644.1.
DR   CAZy; GH33; Glycoside Hydrolase Family 33.
DR   EnsemblBacteria; ADP38272; ADP38272; HMPREF0421_20186.
DR   GeneID; 9903725; -.
DR   KEGG; gvg:HMPREF0421_20186; -.
DR   PATRIC; fig|525284.18.peg.178; -.
DR   HOGENOM; HOG000079971; -.
DR   KO; K01186; -.
DR   OMA; DAPNHIN; -.
DR   OrthoDB; POG091H0EBR; -.
DR   BioCyc; GVAG525284-HMP:GTT2-192-MONOMER; -.
DR   Proteomes; UP000001453; Chromosome.
DR   GO; GO:0004308; F:exo-alpha-sialidase activity; IEA:InterPro.
DR   InterPro; IPR002860; BNR_rpt.
DR   InterPro; IPR013320; ConA-like_dom.
DR   InterPro; IPR026856; Sialidase_fam.
DR   InterPro; IPR011040; Sialidases.
DR   PANTHER; PTHR10628; PTHR10628; 1.
DR   Pfam; PF02012; BNR; 1.
DR   Pfam; PF13088; BNR_2; 1.
DR   SUPFAM; SSF49899; SSF49899; 1.
DR   SUPFAM; SSF50939; SSF50939; 2.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000001453};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001453}.
FT   DOMAIN      601    814       Sialidases. {ECO:0000259|Pfam:PF13088}.
SQ   SEQUENCE   907 AA;  99756 MW;  60F7F5FAA1041E2A CRC64;
     MERRSTKTTS LIEDIADIKG SEHTRFNHAT IKITPSSEIK KYSENESGIN RKDKNEEINQ
     NEGIIGFKFV ANSDCDLLDI KPAQKSEASA QQEHTTPIIK ISIKEDAPLL SAQNLLEDSA
     DANGAKEIAL QMEDALGACD GREHDFAITY GSFGSRFYLD GYQCFASATN LGPQRVSGKA
     AEVCAAQAES SQIYDFYYSS HLPNPEEIAN SATQAQPDIW FAGPTICARD IKRVSCNSSG
     TLHIQFRLRG PGQHGVLFAA GTVGTKTNLE SSEKISVYAG PEGIKITLID SETCIKSVIE
     AAASVDDGEW HDLIIRANRG AIDIYVDGYS ESHNIGQFWF ANIPELNAVS IGEDLRGVRL
     MGEARTGGIY FSALTEGQIQ RISRVKPLVT TALFDTGYAG SRSYRIPSLV KTRMGTLIAG
     ADQRTSVSND APNHINFVIR RSTDGGKTWK PLQTVINMPG KNLGKLGASA IDSCPILDPA
     GKSERINVLI DLNPSGIGLT NCKTDVGVDE CGRIKMEDRF GRHYAALMDG SAAVKLPCDS
     SEKECATKWL VFPDGSIKNC DSHNDLRNNS HSNQTCDSST WNIWKSQEIA SESQPLFAEK
     TCYIAQIYSD DDGKTWSATR LIDHMVKEPW MSFAGVCPGN GIVIRQSEKH YGRILVPFYC
     SGKSKSHYSS GALISDDDGK TWSRGKMINE GRLINGKIVD PATMQDDDAT SSETVFVERK
     NGDILAFFRN QNRSGCVGKA ISHDCGETWS ELIFDTSLPE IFSQPSATCF NSENADNADC
     IAFANASQMM PYRGRGVVRF SYDGGKTWAK SVCINPFHHV YQCLSSSNKR TLQLLWERET
     TGIYITAIDS NLWKQDNLQI DFKSNAKSLN NTDLDCIKNK INTSEKMKDL EEGSLTRTER
     SQHGRDI
//
DBGET integrated database retrieval system