ID E3JXV3_PUCGT Unreviewed; 632 AA.
AC E3JXV3;
DT 11-JAN-2011, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 2.
DT 24-JAN-2024, entry version 68.
DE RecName: Full=histone deacetylase {ECO:0000256|ARBA:ARBA00012111};
DE EC=3.5.1.98 {ECO:0000256|ARBA:ARBA00012111};
GN ORFNames=PGTG_02339 {ECO:0000313|EMBL:EFP76878.2};
OS Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL)
OS (Black stem rust fungus).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina;
OC Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia.
OX NCBI_TaxID=418459 {ECO:0000313|EMBL:EFP76878.2, ECO:0000313|Proteomes:UP000008783};
RN [1]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CRL 75-36-700-3;
RG The Broad Institute Genome Sequencing Platform;
RA Birren B., Lander E., Galagan J., Nusbaum C., Devon K., Cuomo C., Jaffe D.,
RA Butler J., Alvarez P., Gnerre S., Grabherr M., Mauceli E., Brockman W.,
RA Young S., LaButti K., Sykes S., DeCaprio D., Crawford M., Koehrsen M.,
RA Engels R., Montgomery P., Pearson M., Howarth C., Larson L., White J.,
RA Zeng Q., Kodira C., Yandava C., Alvarado L., O'Leary S., Szabo L., Dean R.,
RA Schein J.;
RT "The Genome Sequence of Puccinia graminis f. sp. tritici Strain CRL 75-36-
RT 700-3.";
RL Submitted (JAN-2007) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000008783}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CRL 75-36-700-3 / race SCCL
RC {ECO:0000313|Proteomes:UP000008783};
RX PubMed=21536894; DOI=10.1073/pnas.1019315108;
RA Duplessis S., Cuomo C.A., Lin Y.-C., Aerts A., Tisserant E.,
RA Veneault-Fourrey C., Joly D.L., Hacquard S., Amselem J., Cantarel B.L.,
RA Chiu R., Coutinho P.M., Feau N., Field M., Frey P., Gelhaye E.,
RA Goldberg J., Grabherr M.G., Kodira C.D., Kohler A., Kuees U.,
RA Lindquist E.A., Lucas S.M., Mago R., Mauceli E., Morin E., Murat C.,
RA Pangilinan J.L., Park R., Pearson M., Quesneville H., Rouhier N.,
RA Sakthikumar S., Salamov A.A., Schmutz J., Selles B., Shapiro H.,
RA Tanguay P., Tuskan G.A., Henrissat B., Van de Peer Y., Rouze P.,
RA Ellis J.G., Dodds P.N., Schein J.E., Zhong S., Hamelin R.C.,
RA Grigoriev I.V., Szabo L.J., Martin F.;
RT "Obligate biotrophy features unraveled by the genomic analysis of rust
RT fungi.";
RL Proc. Natl. Acad. Sci. U.S.A. 108:9166-9171(2011).
CC -!- SIMILARITY: Belongs to the histone deacetylase family. HD type 1
CC subfamily. {ECO:0000256|ARBA:ARBA00006457}.
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DR EMBL; DS178266; EFP76878.2; -; Genomic_DNA.
DR RefSeq; XP_003321297.2; XM_003321249.2.
DR AlphaFoldDB; E3JXV3; -.
DR STRING; 418459.E3JXV3; -.
DR EnsemblFungi; EFP76878; EFP76878; PGTG_02339.
DR GeneID; 10529063; -.
DR KEGG; pgr:PGTG_02339; -.
DR VEuPathDB; FungiDB:PGTG_02339; -.
DR eggNOG; KOG1342; Eukaryota.
DR HOGENOM; CLU_007727_0_1_1; -.
DR InParanoid; E3JXV3; -.
DR OrthoDB; 1327607at2759; -.
DR Proteomes; UP000008783; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0070210; C:Rpd3L-Expanded complex; IBA:GO_Central.
DR GO; GO:0004407; F:histone deacetylase activity; IBA:GO_Central.
DR GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 3.40.800.20; Histone deacetylase domain; 1.
DR InterPro; IPR000286; His_deacetylse.
DR InterPro; IPR003084; His_deacetylse_1.
DR InterPro; IPR023801; His_deacetylse_dom.
DR InterPro; IPR037138; His_deacetylse_dom_sf.
DR InterPro; IPR023696; Ureohydrolase_dom_sf.
DR PANTHER; PTHR48252; HISTONE DEACETYLASE 2-RELATED; 1.
DR PANTHER; PTHR48252:SF57; HISTONE DEACETYLASE HDAC1; 1.
DR Pfam; PF00850; Hist_deacetyl; 1.
DR PRINTS; PR01270; HDASUPER.
DR PRINTS; PR01271; HISDACETLASE.
DR SUPFAM; SSF52768; Arginase/deacetylase; 1.
PE 3: Inferred from homology;
KW Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW Reference proteome {ECO:0000313|Proteomes:UP000008783}.
FT DOMAIN 33..321
FT /note="Histone deacetylase"
FT /evidence="ECO:0000259|Pfam:PF00850"
FT REGION 399..551
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 404..422
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 452..496
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 497..536
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 632 AA; 69733 MW; 6975033F4757C690 CRC64;
MSGNMIPIAG EDKKRICYFF DSDIGNYHYG PGHPMKPHRI RMTHALVMNY GLYKKMEIFR
AKPATRKEMA QFHTDDYVDF LSKVTPDNME EFAKEQAKFN LGDDCPVFDG LFEYCSISAG
GSMEGAARLS RDKCDIAVNW AGGLHHAKKA EANGFCYVND IVLGILELLR YHKRVLYVDI
DVHHGDGVEE AFYTTDRVMT CSFHKYGEFF PGTGELRDTG HGKGKHYAVN FPLRDGITDE
AYKNIFEPVI MKIMETYQPS AIVLQCGGDS LSGDRLGSFN VSMRGHANCV RFIKSLGLPL
LLLGGGGYTI RNVSRTWAYE TGLAAGQELC TDIPMNEYYE YFGPTYRLDV PPSNMEDMNV
VKYLEKTKIQ IFENLRHTIP VPSVGLQAIP RLAHDEMDVD EDLDDPNERR PQRLLDGLIQ
RDDEFSDSED EGEGGRRDIQ SHKRARRQSP KMNGNGILSI HSGIQNSFSQ SRHSADLHFN
RPSSSHNSSL SVDTPDPPIV TPTPDPTIAA PTPDPPVTAP APDPPITQPA PDLVVGPEPG
PSALRPTLDP PTVGPIANPH VVPLVPDPRV VTPVAAQPVV VPVEVPPVVV PVAATPIVAP
TPTTALVDIP MLSQVDQMEL EKLTSEAFNA QI
//