ID E6S9Y2_INTC7 Unreviewed; 303 AA.
AC E6S9Y2;
DT 08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT 08-MAR-2011, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE SubName: Full=DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:ADU47172.1};
GN OrderedLocusNames=Intca_0627 {ECO:0000313|EMBL:ADU47172.1};
OS Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC
OS 12989 / 7 KIP).
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Intrasporangiaceae;
OC Intrasporangium.
OX NCBI_TaxID=710696 {ECO:0000313|EMBL:ADU47172.1, ECO:0000313|Proteomes:UP000008914};
RN [1] {ECO:0000313|EMBL:ADU47172.1, ECO:0000313|Proteomes:UP000008914}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP
RC {ECO:0000313|Proteomes:UP000008914};
RX PubMed=21304734; DOI=10.4056/sigs.1263355;
RA Del Rio T.G., Chertkov O., Yasawong M., Lucas S., Deshpande S., Cheng J.F.,
RA Detter C., Tapia R., Han C., Goodwin L., Pitluck S., Liolios K.,
RA Ivanova N., Mavromatis K., Pati A., Chen A., Palaniappan K., Land M.,
RA Hauser L., Chang Y.J., Jeffries C.D., Rohde M., Pukall R., Sikorski J.,
RA Goker M., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA Kyrpides N.C., Klenk H.P., Lapidus A.;
RT "Complete genome sequence of Intrasporangium calvum type strain (7 KIP).";
RL Stand. Genomic Sci. 3:294-303(2010).
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DR EMBL; CP002343; ADU47172.1; -; Genomic_DNA.
DR RefSeq; WP_013491493.1; NC_014830.1.
DR AlphaFoldDB; E6S9Y2; -.
DR STRING; 710696.Intca_0627; -.
DR KEGG; ica:Intca_0627; -.
DR eggNOG; COG3285; Bacteria.
DR HOGENOM; CLU_008325_1_2_11; -.
DR OrthoDB; 9802472at2; -.
DR Proteomes; UP000008914; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR CDD; cd04863; MtLigD_Pol_like; 1.
DR Gene3D; 3.90.920.10; DNA primase, PRIM domain; 1.
DR InterPro; IPR014145; LigD_pol_dom.
DR InterPro; IPR033649; MtLigD_Pol-like.
DR NCBIfam; TIGR02778; ligD_pol; 1.
DR PANTHER; PTHR42705; BIFUNCTIONAL NON-HOMOLOGOUS END JOINING PROTEIN LIGD; 1.
DR PANTHER; PTHR42705:SF2; MULTIFUNCTIONAL NON-HOMOLOGOUS END JOINING DNA REPAIR PROTEIN LIGD; 1.
DR Pfam; PF21686; LigD_Prim-Pol; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Ligase {ECO:0000256|ARBA:ARBA00022598};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000008914}.
FT DOMAIN 38..294
FT /note="DNA ligase D polymerase"
FT /evidence="ECO:0000259|Pfam:PF21686"
SQ SEQUENCE 303 AA; 33400 MW; 364F55AE0BC862CF CRC64;
MPGRQRNENG EKVAVEVEGR RMRLSSLEKV MFPATGTTKA QVIDYYARIA PVLLPHLADR
PVTRIRYPHG VGDLQFFEKN VPAGVPEWIR RAGRDPVFPF IDDLAGLTFF ANLNSLELHV
PQWRFEGEGP DAVPRNPDRL VIDLDPGPGT GLREVSGVAV IVRDRLADIG LATVPVTSGS
KGMQLYARLP GGAHSSDQIR DTVQQLAQEL TKRHPDRIVW KMAKDLRPGK IFLDWSQNVA
AKTTVCPYSL RGREAPTVAA PRTWAEVEAG AAGEELRQLW FNEVLDRVAA HGDLAVEIAA
PAT
//
