ID E8REB5_DESPD Unreviewed; 209 AA.
AC E8REB5;
DT 05-APR-2011, integrated into UniProtKB/TrEMBL.
DT 05-APR-2011, sequence version 1.
DT 03-APR-2013, entry version 17.
DE RecName: Full=30S ribosomal protein S4;
GN Name=rpsD; OrderedLocusNames=Despr_0812;
OS Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).
OC Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales;
OC Desulfobulbaceae; Desulfobulbus.
OX NCBI_TaxID=577650;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33891 / DSM 2032 / 1pr3;
RX PubMed=21475592;
RA Pagani I., Lapidus A., Nolan M., Lucas S., Hammon N., Deshpande S.,
RA Cheng J.F., Chertkov O., Davenport K., Tapia R., Han C., Goodwin L.,
RA Pitluck S., Liolios K., Mavromatis K., Ivanova N., Mikhailova N.,
RA Pati A., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J.,
RA Jeffries C.D., Detter J.C., Brambilla E., Kannan K.P., Djao O.D.,
RA Rohde M., Pukall R., Spring S., Goker M., Sikorski J., Woyke T.,
RA Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C.,
RA Klenk H.P.;
RT "Complete genome sequence of Desulfobulbus propionicus type strain
RT (1pr3).";
RL Stand. Genomic Sci. 4:100-110(2011).
CC -!- FUNCTION: One of the primary rRNA binding proteins, it binds
CC directly to 16S rRNA where it nucleates assembly of the body of
CC the 30S subunit (By similarity).
CC -!- FUNCTION: With S5 and S12 plays an important role in translational
CC accuracy (By similarity).
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. Contacts protein S5.
CC The interaction surface between S4 and S5 is involved in control
CC of translational fidelity (By similarity).
CC -!- SIMILARITY: Belongs to the ribosomal protein S4P family.
CC -!- SIMILARITY: Contains 1 S4 RNA-binding domain.
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DR EMBL; CP002364; ADW16986.1; -; Genomic_DNA.
DR RefSeq; YP_004194277.1; NC_014972.1.
DR EnsemblBacteria; ADW16986; ADW16986; Despr_0812.
DR GeneID; 10173529; -.
DR KEGG; dpr:Despr_0812; -.
DR HOGENOM; HOG000221003; -.
DR KO; K02986; -.
DR OMA; THGHILV; -.
DR BioCyc; DPRO577650:GH80-830-MONOMER; -.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:HAMAP.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:HAMAP.
DR Gene3D; 1.10.1050.10; -; 1.
DR Gene3D; 3.10.290.10; -; 1.
DR HAMAP; MF_01306_B; Ribosomal_S4_B; 1; -.
DR InterPro; IPR022801; Ribosomal_S4/S9.
DR InterPro; IPR001912; Ribosomal_S4/S9_N.
DR InterPro; IPR005709; Ribosomal_S4_bac-type.
DR InterPro; IPR018079; Ribosomal_S4_CS.
DR InterPro; IPR002942; S4_RNA-bd.
DR PANTHER; PTHR11831; PTHR11831; 1.
DR Pfam; PF00163; Ribosomal_S4; 1.
DR Pfam; PF01479; S4; 1.
DR SMART; SM00363; S4; 1.
DR TIGRFAMs; TIGR01017; rpsD_bact; 1.
DR PROSITE; PS00632; RIBOSOMAL_S4; 1.
DR PROSITE; PS50889; S4; 1.
PE 3: Inferred from homology;
KW Complete proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT DOMAIN 99 162 S4 RNA-binding (By similarity).
SQ SEQUENCE 209 AA; 24396 MW; 3FE2CF8B37451D72 CRC64;
MARYTGASCR LCRRENLKMF LKGDRCYSDK CAFERRSFAP GQHGQNRFRK VSDYAVQLRE
KQKVKQMYGM LEAQFRRYFE RAERAKGVTG ETLLIMLERR LDNVLYRSGF ASSRDQARQM
VRHNLFTLNG KKVNIPSHQV NAGDIIALKE KYQKSEQVID NLEGAVRRGL PSWLELDQAK
FHCAVKALPN REEITMPIQE QLIVELYSK
//
