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Database: UniProt/TrEMBL
Entry: F0ZI28_DICPU
LinkDB: F0ZI28_DICPU
Original site: F0ZI28_DICPU 
ID   F0ZI28_DICPU            Unreviewed;      1076 AA.
AC   F0ZI28;
DT   03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT   03-MAY-2011, sequence version 1.
DT   20-DEC-2017, entry version 36.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EGC36387.1};
GN   ORFNames=DICPUDRAFT_97591 {ECO:0000313|EMBL:EGC36387.1};
OS   Dictyostelium purpureum (Slime mold).
OC   Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.
OX   NCBI_TaxID=5786 {ECO:0000313|Proteomes:UP000001064};
RN   [1] {ECO:0000313|Proteomes:UP000001064}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=QSDP1 {ECO:0000313|Proteomes:UP000001064};
RX   PubMed=21356102; DOI=10.1186/gb-2011-12-2-r20;
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Sucgang R., Kuo A., Tian X., Salerno W., Parikh A., Feasley C.L.,
RA   Dalin E., Tu H., Huang E., Barry K., Lindquist E., Shapiro H.,
RA   Bruce D., Schmutz J., Salamov A., Fey P., Gaudet P., Anjard C.,
RA   Babu M.M., Basu S., Bushmanova Y., van der Wel H., Katoh-Kurasawa M.,
RA   Dinh C., Coutinho P.M., Saito T., Elias M., Schaap P., Kay R.R.,
RA   Henrissat B., Eichinger L., Rivero F., Putnam N.H., West C.M.,
RA   Loomis W.F., Chisholm R.L., Shaulsky G., Strassmann J.E.,
RA   Queller D.C., Kuspa A., Grigoriev I.V.;
RT   "Comparative genomics of the social amoebae Dictyostelium discoideum
RT   and Dictyostelium purpureum.";
RL   Genome Biol. 12:R20.1-R20.23(2011).
CC   -!- SIMILARITY: Belongs to the ATP-dependent DNA ligase family.
CC       {ECO:0000256|RuleBase:RU004196}.
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DR   EMBL; GL871028; EGC36387.1; -; Genomic_DNA.
DR   RefSeq; XP_003287084.1; XM_003287036.1.
DR   STRING; 5786.XP_003287084.1; -.
DR   EnsemblProtists; EGC36387; EGC36387; DICPUDRAFT_97591.
DR   GeneID; 10500716; -.
DR   KEGG; dpp:DICPUDRAFT_97591; -.
DR   eggNOG; KOG0966; Eukaryota.
DR   eggNOG; COG1793; LUCA.
DR   InParanoid; F0ZI28; -.
DR   KO; K10777; -.
DR   OMA; HMCPSTK; -.
DR   Proteomes; UP000001064; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0032807; C:DNA ligase IV complex; IBA:GO_Central.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IBA:GO_Central.
DR   GO; GO:0071897; P:DNA biosynthetic process; IEA:InterPro.
DR   GO; GO:0051103; P:DNA ligation involved in DNA repair; IBA:GO_Central.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006303; P:double-strand break repair via nonhomologous end joining; IBA:GO_Central.
DR   GO; GO:0006297; P:nucleotide-excision repair, DNA gap filling; IBA:GO_Central.
DR   CDD; cd00027; BRCT; 2.
DR   Gene3D; 1.10.3260.10; -; 1.
DR   Gene3D; 3.40.50.10190; -; 2.
DR   InterPro; IPR001357; BRCT_dom.
DR   InterPro; IPR036420; BRCT_dom_sf.
DR   InterPro; IPR000977; DNA_ligase_ATP-dep.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR012308; DNA_ligase_ATP-dep_N.
DR   InterPro; IPR021536; DNA_ligase_IV_dom.
DR   InterPro; IPR036599; DNA_ligase_N_sf.
DR   InterPro; IPR029710; LIG4.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   PANTHER; PTHR10459:SF7; PTHR10459:SF7; 1.
DR   Pfam; PF00533; BRCT; 1.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF04675; DNA_ligase_A_N; 1.
DR   Pfam; PF11411; DNA_ligase_IV; 1.
DR   SMART; SM00292; BRCT; 2.
DR   SUPFAM; SSF117018; SSF117018; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   SUPFAM; SSF52113; SSF52113; 2.
DR   TIGRFAMs; TIGR00574; dnl1; 1.
DR   PROSITE; PS50172; BRCT; 2.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001064};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001064}.
FT   DOMAIN      481    617       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
FT   DOMAIN      801    891       BRCT. {ECO:0000259|PROSITE:PS50172}.
FT   DOMAIN      983   1076       BRCT. {ECO:0000259|PROSITE:PS50172}.
FT   COILED        8     28       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   1076 AA;  123925 MW;  19D9BC3FC2315D4B CRC64;
     MDRLSLFLSE DEEENEETKN NTQNINDNSK NNLYNAFINN NYNNNNISDQ QPIISTPQQQ
     QLQQQQQQQK INSPIKNSKK DIDDNDIIKA FKDNKINVRN QNQNQINDYK YQKTVPFTTF
     CNLLDKIIND TKISNKKKYL SIFFSKYKEE PNNYFQLLRL LLPHMDRDRN TYGIKEKTLA
     RLYVELLNIS VESQDATRLL NWRKSTNADE IGGDFGSAIY LSLKNRCLEK GILSMGDINE
     ALDRLNQVDD NKSKALILKK VLRSSTAQEQ KWFVRLILKE MKMGLNEKTA LKFFHPSAMD
     HLSITSNLRL VCSNLFYMSP EEQKKLKDEQ KPVTSNATVL DIHNLKIETF NAIRPMLADR
     KPIDYLFSIL DNNPYHVPSS NGLGPSTTSY IIEKKYDGER TQIHKDGNDI RFYSRNTNDT
     TFIYGSLLLP IVKECVLADK CILDGELIVW DTVTQRFEDF GKLKTLALNK DGISGSGDPL
     GANYGKQLCY IAFDILFVKD KSVMPLPLAQ RTMLLKRCIN VKDKQFEISE QTPVSTVQEV
     LGQLDAAIMN REEGLMLKDL NSFYVPAERK EKWIKIKPEY LDGMGDDFDL VIIGGYYGSG
     INRRGGTISH FMLGVAYCPD DVVDEESLQE KVVFYSFCKV GSGYTDEQLK ILQKELDPHW
     SPFNTNKPPS CIQLAEPFKE KPDVWIDPRK FSKVVQIKAA QLNPTEKYKA GYTLRFPRVL
     KIRDDKSWQD CSTFSDILEL YKNFQNNDFK FKTLLNNNSI KTTTQKKRKL EINGISEAGS
     GPGKLKVLSI FQDTDTSNIV PIQNIFQGLE FCVIKGNQQY TKSKLEIMIV ELGGTKVQNP
     SKNNTHYVIG SKEVVKIQNL ISSGFFDIVL FQWVVDCYNE QKLIPLGPKY MIFTTESTKK
     KFLLESDPFG DSYFNETNFS ELKDCFNQVD KENCNHSNST NINNNKQIIK GNKNQKLLNN
     EQFSIDKSII ELKYFSKNCW WTLFKPNVFY LDRYQVIGEP STLIENNNLE LSSLYIEFYG
     GTVSLQLNDT VTHVVIDQSD QSRIPFINNK INSIKKLNQI EIINPNWIKN LIDNIK
//
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