ID Q9SKI4_ARATH Unreviewed; 640 AA.
AC Q9SKI4;
DT 01-MAY-2000, integrated into UniProtKB/TrEMBL.
DT 01-MAY-2000, sequence version 1.
DT 01-MAY-2013, entry version 84.
DE SubName: Full=At2g06510;
DE SubName: Full=Putative replication protein A1;
DE SubName: Full=Replication factor A1;
GN Name=At2g06510/T12H3.6; Synonyms=RPA1A; OrderedLocusNames=At2g06510;
GN ORFNames=AT2G06510;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L.,
RA Moffat K.S., Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L.,
RA Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H.,
RA Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D.,
RA Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M.,
RA Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis
RT thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP NUCLEOTIDE SEQUENCE.
RA Lin X., Kaul S., Shea T.P., Fujii C.Y., Shen M., VanAken S.E.,
RA Barnstead M.E., Mason T.M., Bowman C.L., Ronning C.M., Benito M.-I.,
RA Carrera A.J., Creasy T.H., Buell C.R., Town C.D., Nierman W.C.,
RA Fraser C.M., Venter J.C.;
RL Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE.
RA Town C.D., Kaul S.;
RL Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE.
RA Seki M., Iida K., Satou M., Sakurai T., Akiyama K., Ishida J.,
RA Nakajima M., Enju A., Kamiya A., Narusaka M., Carninci P., Kawai J.,
RA Hayashizaki Y., Shinozaki K.;
RT "Arabidopsis thaliana full-length cDNA.";
RL Submitted (NOV-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP NUCLEOTIDE SEQUENCE.
RA Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P.,
RA Chan M.M., Chang C.H., Dale J.M., Hayashizaki Y., Hsuan V.W.,
RA Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B.,
RA Lee J.M., Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S.,
RA Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A.,
RA Tang C.C., Toriumi M., Wong C., Wu H.C., Yamada K., Yu G., Yuan S.,
RA Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP NUCLEOTIDE SEQUENCE.
RG TAIR;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [7]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RG The Arabidopsis Information Resource (TAIR);
RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AC006420; AAD25150.1; -; Genomic_DNA.
DR EMBL; BT005946; AAO64881.1; -; mRNA.
DR EMBL; CP002685; AEC06010.1; -; Genomic_DNA.
DR EMBL; AK118699; BAC43293.1; -; mRNA.
DR IPI; IPI00523631; -.
DR PIR; B84478; B84478.
DR RefSeq; NP_178690.1; NM_126648.3.
DR UniGene; At.22213; -.
DR UniGene; At.71077; -.
DR HSSP; P27694; 1FGU.
DR SMR; Q9SKI4; 5-116, 196-638.
DR IntAct; Q9SKI4; 1.
DR EnsemblPlants; AT2G06510.1; AT2G06510.1; AT2G06510.
DR GeneID; 815209; -.
DR KEGG; ath:AT2G06510; -.
DR TAIR; At2g06510; -.
DR eggNOG; COG1599; -.
DR HOGENOM; HOG000162322; -.
DR InParanoid; Q9SKI4; -.
DR KO; K07466; -.
DR OMA; ICQVNRF; -.
DR ProtClustDB; CLSN2683265; -.
DR Genevestigator; Q9SKI4; -.
DR GO; GO:0000790; C:nuclear chromatin; IDA:TAIR.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0051026; P:chiasma assembly; IMP:TAIR.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR GO; GO:0048232; P:male gamete generation; IMP:TAIR.
DR GO; GO:0007141; P:male meiosis I; IMP:TAIR.
DR GO; GO:0009555; P:pollen development; IMP:TAIR.
DR GO; GO:0007131; P:reciprocal meiotic recombination; IGI:TAIR.
DR Gene3D; 2.40.50.140; -; 4.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR004365; NA-bd_OB_tRNA-helicase.
DR InterPro; IPR013955; Rep_factor-A_C.
DR InterPro; IPR007199; Rep_factor-A_N.
DR InterPro; IPR004591; Rep_factor_Rpa1.
DR Pfam; PF04057; Rep-A_N; 1.
DR Pfam; PF08646; Rep_fac-A_C; 1.
DR Pfam; PF01336; tRNA_anti; 1.
DR SUPFAM; SSF50249; Nucleic_acid_OB; 4.
DR TIGRFAMs; TIGR00617; rpa1; 1.
PE 2: Evidence at transcript level;
KW Complete proteome; Reference proteome.
SQ SEQUENCE 640 AA; 72243 MW; 96A941DDFE0B08A9 CRC64;
MPVSLTPNAI TAIHDGDVNL KPLLQVLEIK MIGRSQERSQ ERYRFLISDG VSAQHAMVAV
QLNDRVKSGQ FEKGSIVQLI DYICSDVKGR KLIVVLNMET IVQQSETIGN PTIFGETDTE
AQKTFSGTGN IPPPNRVVFN EPMVQHSVNR APPRGVNIQN QANNTPSFRP SVQPSYQPPA
SYRNHGPIMK NEAPARVIPI AALNPYQGRW AIKARVTAKG DIRRYNNAKG DGKVFSFDLL
DYDGGEIRVT CFNALVDRFY DVTEVGKVYL ISKGSLKPAQ KNFNHLKNEW EIFLESTSTV
ELCPDEDGSI PKQQFSFRPI SDIENAENNT ILDVIGVVTS VNPSVPILRK NGMETHRRIL
NLKDESGKAV EVTLWGEFCN RDGRQLEEMV DSAFHPVLAI KAGKVSDFSG KSVGTISSTQ
LFINPDFPEA HKLRTWFDYG GKDTASFSIS RDTMPGGVSR NEIRKNVSQI KEEGLGRSDK
PDWITVKATI SFIKTDSFCY TACPLMIGDK QCNKKVTRSG TNRWLCDRCN QESDECDYRY
LLQVQIQDHT GLTWITAFQE TGEEIMGCPA KKLYAMKYEL EKEEEFAEIV RDRLFHQYML
KLKIKEESYG DEQRVKMTVV KVDKVNYTSE SKYMLDLLVR
//
