ID F4IJB6_ARATH Unreviewed; 408 AA.
AC F4IJB6;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 2.
DT 27-MAR-2024, entry version 78.
DE SubName: Full=Beta-galactosidase related protein {ECO:0000313|EMBL:AEC06020.2};
GN OrderedLocusNames=At2g06845 {ECO:0000313|Araport:AT2G06845,
GN ECO:0000313|EMBL:AEC06020.2};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:AEC06020.2, ECO:0000313|Proteomes:UP000006548};
RN [1] {ECO:0000313|EMBL:AEC06020.2, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S., Shea T.P., Benito M.I., Town C.D.,
RA Fujii C.Y., Mason T., Bowman C.L., Barnstead M., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; CP002685; AEC06020.2; -; Genomic_DNA.
DR RefSeq; NP_671791.2; NM_147258.2.
DR AlphaFoldDB; F4IJB6; -.
DR SMR; F4IJB6; -.
DR STRING; 3702.F4IJB6; -.
DR iPTMnet; F4IJB6; -.
DR PaxDb; 3702-AT2G06845-1; -.
DR EnsemblPlants; AT2G06845.1; AT2G06845.1; AT2G06845.
DR GeneID; 815246; -.
DR Gramene; AT2G06845.1; AT2G06845.1; AT2G06845.
DR KEGG; ath:AT2G06845; -.
DR Araport; AT2G06845; -.
DR TAIR; AT2G06845; -.
DR eggNOG; KOG1075; Eukaryota.
DR HOGENOM; CLU_883824_0_0_1; -.
DR InParanoid; F4IJB6; -.
DR OrthoDB; 694737at2759; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; F4IJB6; differential.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd06222; RNase_H_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR026960; RVT-Znf.
DR PANTHER; PTHR47074; BNAC02G40300D PROTEIN; 1.
DR PANTHER; PTHR47074:SF72; REVERSE TRANSCRIPTASE-LIKE PROTEIN; 1.
DR Pfam; PF13456; RVT_3; 1.
DR Pfam; PF13966; zf-RVT; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006548}.
FT DOMAIN 155..194
FT /note="Reverse transcriptase zinc-binding"
FT /evidence="ECO:0000259|Pfam:PF13966"
FT DOMAIN 280..399
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|Pfam:PF13456"
SQ SEQUENCE 408 AA; 45397 MW; C8D540988EFEF7B3 CRC64;
MVPLDWSDSY LCRVQMLSLF WTLPEILFPT YCLLPFTVKK IDIMIPPLRS GYYQRFFTSL
PTHSPIIEFS HVLIYCLDNL QSSVCLGKYG IMTMSSRGGY RLFLNLVNPS ASSVEHLFKS
SDALFARAAY DHLVVEDFAK LAFMLIYYTF KLSDATGQQL LDRHIAIDAS CCRCGEPETI
LHMLFHCQFA QLVWSPTPFA RHWASVGAGS VREGLITGCK LACLPPTGIA SGPLAPWICW
SLWKSRNQKV FSTRFFTPEE TLLKAITNAK EWLAAQGKSP DGSWRNDLKA AGLGWTFTNP
AGLTSHHSAL CKNVSSPFMA ESLACGAVVL EAVRAGADSF LLESDYQQLV VAINARLVLL
EVHGIISYIF LSIGRFSHFL CRFIPLSTNV VADSLAKQCL SLYGQNIC
//
