ID F5Z238_MYCSD Unreviewed; 301 AA.
AC F5Z238;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 24-JAN-2024, entry version 43.
DE SubName: Full=DNA ligase-like protein {ECO:0000313|EMBL:AEF37038.1};
GN OrderedLocusNames=JDM601_3038 {ECO:0000313|EMBL:AEF37038.1};
OS Mycolicibacter sinensis (strain JDM601) (Mycobacterium sinense).
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae;
OC Mycolicibacter.
OX NCBI_TaxID=875328 {ECO:0000313|EMBL:AEF37038.1, ECO:0000313|Proteomes:UP000009224};
RN [1] {ECO:0000313|EMBL:AEF37038.1, ECO:0000313|Proteomes:UP000009224}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JDM601 {ECO:0000313|EMBL:AEF37038.1,
RC ECO:0000313|Proteomes:UP000009224};
RX PubMed=21685274; DOI=10.1128/JB.05291-11;
RA Zhang Z.Y., Sun Z.Q., Wang Z.L., Wen Z.L., Sun Q.W., Zhu Z.Q., Song Y.Z.,
RA Zhao J.W., Wang H.H., Zhang S.L., Guo X.K.;
RT "Complete genome sequence of a novel clinical isolate, the nontuberculous
RT Mycobacterium strain JDM601.";
RL J. Bacteriol. 193:4300-4301(2011).
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DR EMBL; CP002329; AEF37038.1; -; Genomic_DNA.
DR RefSeq; WP_013829967.1; NC_015576.1.
DR AlphaFoldDB; F5Z238; -.
DR STRING; 875328.JDM601_3038; -.
DR KEGG; mjd:JDM601_3038; -.
DR eggNOG; COG3285; Bacteria.
DR HOGENOM; CLU_008325_1_1_11; -.
DR OMA; DIQRNAY; -.
DR OrthoDB; 4296267at2; -.
DR Proteomes; UP000009224; Chromosome.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR Gene3D; 3.90.920.10; DNA primase, PRIM domain; 1.
DR InterPro; IPR014145; LigD_pol_dom.
DR NCBIfam; TIGR02778; ligD_pol; 1.
DR PANTHER; PTHR42705; BIFUNCTIONAL NON-HOMOLOGOUS END JOINING PROTEIN LIGD; 1.
DR PANTHER; PTHR42705:SF2; BIFUNCTIONAL NON-HOMOLOGOUS END JOINING PROTEIN LIGD; 1.
DR Pfam; PF21686; LigD_Prim-Pol; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Ligase {ECO:0000256|ARBA:ARBA00022598, ECO:0000313|EMBL:AEF37038.1};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000009224}.
FT DOMAIN 25..279
FT /note="DNA ligase D polymerase"
FT /evidence="ECO:0000259|Pfam:PF21686"
SQ SEQUENCE 301 AA; 33225 MW; C6E405E53C9814BD CRC64;
MKPNVSITHP DRVLFPASDT HEAITKGDLI DYYAELAPVM VPHLDGRPLT LTRFPGGIDE
EGFIQQNFAA ALPDWMDRVE VARKSGEGTV VHPVVTREEA LVWAANQDCI TLHSWSSRRP
HLDTPDRLIF DLDPADDDFA VVRATARSVA DVVQELGMTA YVQTTGSRGL HIVAPLRGDA
DFDTAREFAS TIAGLVVDDD PLHRTREIRK AGRGGRVYVD VMRNAYGQTG VAPYAVRARA
GAPVALPLEW DELDIPGIRP DGWTLRDVPK RMCERGDPWA DMYRQACALA PLRDRLAKLG
A
//