ID F8VJ08_SALBC Unreviewed; 330 AA.
AC F8VJ08;
DT 21-SEP-2011, integrated into UniProtKB/TrEMBL.
DT 21-SEP-2011, sequence version 1.
DT 01-MAY-2013, entry version 12.
DE RecName: Full=RNA polymerase sigma factor;
GN Name=rpoS; OrderedLocusNames=SBG_2538;
OS Salmonella bongori (strain ATCC 43975 / DSM 13772 / NCTC 12419).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC Enterobacteriaceae; Salmonella.
OX NCBI_TaxID=218493;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43975 / DSM 13772 / NCTC 12419;
RX PubMed=21876672; DOI=10.1371/journal.ppat.1002191;
RA Fookes M., Schroeder G.N., Langridge G.C., Blondel C.J., Mammina C.,
RA Connor T.R., Seth-Smith H., Vernikos G.S., Robinson K.S., Sanders M.,
RA Petty N.K., Kingsley R.A., Baumler A.J., Nuccio S.P., Contreras I.,
RA Santiviago C.A., Maskell D., Barrow P., Humphrey T., Nastasi A.,
RA Roberts M., Frankel G., Parkhill J., Dougan G., Thomson N.R.;
RT "Salmonella bongori provides insights into the evolution of the
RT Salmonellae.";
RL PLoS Pathog. 7:E1002191-E1002191(2011).
CC -!- FUNCTION: Sigma factors are initiation factors that promote the
CC attachment of RNA polymerase to specific initiation sites and are
CC then released (By similarity).
CC -!- SIMILARITY: Belongs to the sigma-70 factor family.
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DR EMBL; FR877557; CCC31593.1; -; Genomic_DNA.
DR RefSeq; YP_004731357.1; NC_015761.1.
DR ProteinModelPortal; F8VJ08; -.
DR SMR; F8VJ08; 89-202.
DR PRIDE; F8VJ08; -.
DR GeneID; 10967877; -.
DR KEGG; sbg:SBG_2538; -.
DR KO; K03087; -.
DR BioCyc; SBON218493:GJAH-2553-MONOMER; -.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-dependent transcription, initiation; IEA:InterPro.
DR Gene3D; 1.10.10.10; -; 2.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR009042; RNA_pol_sigma70_r1_2.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007624; RNA_pol_sigma70_r3.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3_r4.
DR InterPro; IPR012761; RNA_pol_sigma_RpoS_proteobac.
DR InterPro; IPR011991; WHTH_DNA-bd_dom.
DR Pfam; PF00140; Sigma70_r1_2; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04539; Sigma70_r3; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR PRINTS; PR00046; SIGMA70FCT.
DR SUPFAM; SSF88946; Sigma_r2; 1.
DR SUPFAM; SSF88659; Sigma_r3_r4; 2.
DR TIGRFAMs; TIGR02394; rpoS_proteo; 1.
DR TIGRFAMs; TIGR02937; sigma70-ECF; 1.
DR PROSITE; PS00715; SIGMA70_1; 1.
DR PROSITE; PS00716; SIGMA70_2; 1.
PE 3: Inferred from homology;
KW Complete proteome; DNA-binding; Sigma factor; Transcription;
KW Transcription regulation.
SQ SEQUENCE 330 AA; 37933 MW; 4400E48DEB358ECC CRC64;
MSQNTLKVHD LNEDAEFDEN GVEAFDEKAL SEEEPSDNDL AEEELLSQGA TQRVLDATQL
YLGEIGYSPL LTAEEEVYFA RRALRGDVAS RRRMIESNLR LVVKIARRYG NRGLALLDLI
EEGNLGLIRA VEKFDPERGF RFSTYATWWI RQTIERAIMN QTRTIRLPIH IVKELNVYLR
TARELSHKLD HEPSAEEIAE QLDKPVDDVS RMLRLNERIT SVDTPLGGDS EKALLDILAD
EKENGPEDTT QDDDMKQSIV KWLFELNAKQ REVLARRFGL LGYEAATLED VGREIGLTRE
RVRQIQVEGL RRLREILQTQ GLNIEALFRE
//
