ID G7W0E0_PAETH Unreviewed; 300 AA.
AC G7W0E0;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 25-JAN-2012, sequence version 1.
DT 24-JAN-2024, entry version 41.
DE SubName: Full=Eukaryotic-type DNA primase {ECO:0000313|EMBL:AET59561.1};
GN OrderedLocusNames=HPL003_14050 {ECO:0000313|EMBL:AET59561.1};
OS Paenibacillus terrae (strain HPL-003).
OC Bacteria; Bacillota; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.
OX NCBI_TaxID=985665 {ECO:0000313|EMBL:AET59561.1, ECO:0000313|Proteomes:UP000005876};
RN [1] {ECO:0000313|Proteomes:UP000005876}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HPL-003 {ECO:0000313|Proteomes:UP000005876};
RA Shin S.H., Kim S., Kim J.Y.;
RT "Complete sequence of Paenibacillus terrae HPL-003.";
RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=HPL-003;
RA Shin S.H., Kim S., Kim J.Y.;
RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:AET59561.1, ECO:0000313|Proteomes:UP000005876}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HPL-003 {ECO:0000313|EMBL:AET59561.1,
RC ECO:0000313|Proteomes:UP000005876};
RX PubMed=22328761; DOI=10.1128/JB.06668-11;
RA Shin S.H., Kim S., Kim J.Y., Song H.Y., Cho S.J., Kim D.R., Lee K.I.,
RA Lim H.K., Park N.J., Hwang I.T., Yang K.S.;
RT "Genome Sequence of Paenibacillus terrae HPL-003, a Xylanase-Producing
RT Bacterium Isolated from Soil Found in Forest Residue.";
RL J. Bacteriol. 194:1266-1266(2012).
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DR EMBL; CP003107; AET59561.1; -; Genomic_DNA.
DR RefSeq; WP_014280288.1; NC_016641.1.
DR AlphaFoldDB; G7W0E0; -.
DR STRING; 985665.HPL003_14050; -.
DR KEGG; pta:HPL003_14050; -.
DR eggNOG; COG3285; Bacteria.
DR HOGENOM; CLU_008325_1_1_9; -.
DR OMA; TTAWWKE; -.
DR OrthoDB; 9802472at2; -.
DR Proteomes; UP000005876; Chromosome.
DR Gene3D; 3.90.920.10; DNA primase, PRIM domain; 1.
DR InterPro; IPR014145; LigD_pol_dom.
DR NCBIfam; TIGR02778; ligD_pol; 1.
DR PANTHER; PTHR42705; BIFUNCTIONAL NON-HOMOLOGOUS END JOINING PROTEIN LIGD; 1.
DR PANTHER; PTHR42705:SF2; BIFUNCTIONAL NON-HOMOLOGOUS END JOINING PROTEIN LIGD; 1.
DR Pfam; PF21686; LigD_Prim-Pol; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Ligase {ECO:0000256|ARBA:ARBA00022598};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741}.
FT DOMAIN 32..277
FT /note="DNA ligase D polymerase"
FT /evidence="ECO:0000259|Pfam:PF21686"
SQ SEQUENCE 300 AA; 33688 MW; DA8430925D0299DF CRC64;
MGQAIKGIIT IEGLEIPITN PDKPLWPEAG VTKAMYLRKL AVLAPFLLKY SHNRLLTVIR
WPHGIHGDFF YQKNTPQPRP DYIETFLHDG IEYMVLGTLA QLLWLGNQAA LEFHPSLHPV
GSTLPCEWMI DLDPSREVEP RIMEAASIVG EVLASLGLES VPKTSGATGV QIIVPIRTGI
TFDELRSIGL LVGQFVTEKH PHLFTLERLK KDRGTAIYFD YLQHYKGKTL AAPYTPRARP
GATVSTPLTW DEVRQNVSPL DYHLLNIEER LNQMGDLIAK VPPQPIEDVL KHMRAKTHSS
//