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Database: UniProt/TrEMBL
Entry: G8Q248_PSEFL
LinkDB: G8Q248_PSEFL
Original site: G8Q248_PSEFL 
ID   G8Q248_PSEFL            Unreviewed;       871 AA.
AC   G8Q248;
DT   22-FEB-2012, integrated into UniProtKB/TrEMBL.
DT   22-FEB-2012, sequence version 1.
DT   07-JUN-2017, entry version 42.
DE   SubName: Full=LigD {ECO:0000313|EMBL:AEV62937.1};
DE            EC=1.11.1.9 {ECO:0000313|EMBL:AEV62937.1};
DE            EC=6.5.1.1 {ECO:0000313|EMBL:AEV62937.1};
GN   Name=ligD2 {ECO:0000313|EMBL:AEV62937.1};
GN   ORFNames=PSF113_2933 {ECO:0000313|EMBL:AEV62937.1};
OS   Pseudomonas fluorescens F113.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=1114970 {ECO:0000313|EMBL:AEV62937.1, ECO:0000313|Proteomes:UP000005437};
RN   [1] {ECO:0000313|EMBL:AEV62937.1, ECO:0000313|Proteomes:UP000005437}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=F113 {ECO:0000313|EMBL:AEV62937.1,
RC   ECO:0000313|Proteomes:UP000005437};
RX   PubMed=22328765; DOI=10.1128/JB.06601-11;
RA   Redondo-Nieto M., Barret M., Morrisey J.P., Germaine K.,
RA   Martinez-Granero F., Barahona E., Navazo A., Sanchez-Contreras M.,
RA   Moynihan J.A., Giddens S.R., Coppoolse E.R., Muriel C., Stiekema W.J.,
RA   Rainey P.B., Dowling D., O'Gara F., Martin M., Rivilla R.;
RT   "Genome Sequence of the Biocontrol Strain Pseudomonas fluorescens
RT   F113.";
RL   J. Bacteriol. 194:1273-1274(2012).
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DR   EMBL; CP003150; AEV62937.1; -; Genomic_DNA.
DR   RefSeq; WP_014338381.1; NC_016830.1.
DR   STRING; 1114970.PSF113_2933; -.
DR   EnsemblBacteria; AEV62937; AEV62937; PSF113_2933.
DR   GeneID; 11831028; -.
DR   KEGG; pfe:PSF113_2933; -.
DR   PATRIC; fig|1114970.3.peg.2992; -.
DR   eggNOG; ENOG4105DQE; Bacteria.
DR   eggNOG; COG1793; LUCA.
DR   eggNOG; COG3285; LUCA.
DR   KO; K01971; -.
DR   Proteomes; UP000005437; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:UniProtKB-EC.
DR   GO; GO:0004602; F:glutathione peroxidase activity; IEA:UniProtKB-EC.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000005437};
KW   Ligase {ECO:0000313|EMBL:AEV62937.1};
KW   Oxidoreductase {ECO:0000313|EMBL:AEV62937.1};
KW   Peroxidase {ECO:0000313|EMBL:AEV62937.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000005437}.
FT   DOMAIN      324    430       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   871 AA;  96171 MW;  F2FE13F8D457EFD0 CRC64;
     MSRKTLDDYN RMRDFAATPE PAAKRSRKSA RTAHALQFCI QKHDASRLHY DFRLELDGAL
     KSWAVPKGPS LDPKAKRLAV HVEDHPLDYA TFEGNIPEGH YGAGDVIVWD RGVWIPQDDP
     HEAYEKGRLK FELQGEKLSG LWNLVRTHMP GKQEQWFLIK HQDQAARPES EYDVVQAEPN
     SVLSDRTLVP KRRGKAATAK ALKQPEKAVQ AKSPRRAAKT TLSGAVAGPL PETLKPELAT
     LVDSAPDGEW LYEIKFDGYR VMARIENGGV KLLTRNGHDW THKLPRQAEA LAALGLESAW
     LDGEMVVAND QGVPDFQALQ NAFEAGSSGK IAYYLFDMPY LNGMDLRKVP VQERRAALAA
     VLEPNQSPLL RFSDAFEETP EALLNSACQM QMEGLIGKRI GSAYVSRRSN DWIKLKCKNR
     QEFVVVGFSD PKGARSAFGA LLLGLHDADS GQLRYAGKVG TGFNETTLKS IYQRLLPLER
     KEPAVANPPT GYEAKGVHWL EPTLLAEVAF AEMTKDGSVR HAVFHGLRND KPAKEITQEL
     AKPMKKTAAT KKTKAKDEPG ATPAKTKSKA KAPALDGKVR ITHPERVIDA SSGTTKLQLA
     EYYASVAEFI LPELADRPAA LVRAPDGIAG ELFFQKNAER LAIPGITSLD KALTGQPVMI
     INNAEALIGA VQMSTVELHT WNATSVDLDK PDRFVLDLDP DPALPWKSMV EATQLTLSVL
     DELGLKAFLK TSGGKGIHVV VPLTRKLGWD EVKGFSHAIV SHMAKLLPDR FSAVSGPKNR
     VGRIFIDYLR NGLGATTICA YAARTREGLP VSVPVFREEV AELKGANLWN VHNVHERLAQ
     VGHEPWAGLK RTRQSITAEM RRRIGMRETD K
//
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