ID I0Z455_COCSC Unreviewed; 483 AA.
AC I0Z455;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 22-FEB-2023, entry version 42.
DE SubName: Full=SET domain-containing protein {ECO:0000313|EMBL:EIE25424.1};
DE Flags: Fragment;
GN ORFNames=COCSUDRAFT_13194 {ECO:0000313|EMBL:EIE25424.1};
OS Coccomyxa subellipsoidea (strain C-169) (Green microalga).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae;
OC Trebouxiophyceae incertae sedis; Elliptochloris clade; Coccomyxa;
OC Coccomyxa subellipsoidea.
OX NCBI_TaxID=574566 {ECO:0000313|EMBL:EIE25424.1, ECO:0000313|Proteomes:UP000007264};
RN [1] {ECO:0000313|EMBL:EIE25424.1, ECO:0000313|Proteomes:UP000007264}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C-169 {ECO:0000313|EMBL:EIE25424.1,
RC ECO:0000313|Proteomes:UP000007264};
RX PubMed=22630137; DOI=10.1186/gb-2012-13-5-r39;
RA Blanc G., Agarkova I., Grimwood J., Kuo A., Brueggeman A., Dunigan D.,
RA Gurnon J., Ladunga I., Lindquist E., Lucas S., Pangilinan J., Proschold T.,
RA Salamov A., Schmutz J., Weeks D., Yamada T., Claverie J.M., Grigoriev I.,
RA Van Etten J., Lomsadze A., Borodovsky M.;
RT "The genome of the polar eukaryotic microalga coccomyxa subellipsoidea
RT reveals traits of cold adaptation.";
RL Genome Biol. 13:R39-R39(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-ProRule:PRU00358}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIE25424.1}.
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DR EMBL; AGSI01000004; EIE25424.1; -; Genomic_DNA.
DR RefSeq; XP_005649968.1; XM_005649911.1.
DR AlphaFoldDB; I0Z455; -.
DR STRING; 574566.I0Z455; -.
DR GeneID; 17043426; -.
DR KEGG; csl:COCSUDRAFT_13194; -.
DR eggNOG; KOG1082; Eukaryota.
DR OrthoDB; 5481936at2759; -.
DR Proteomes; UP000007264; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR Gene3D; 2.170.270.10; SET domain; 1.
DR Gene3D; 2.30.280.10; SRA-YDG; 1.
DR InterPro; IPR015947; PUA-like_sf.
DR InterPro; IPR001214; SET_dom.
DR InterPro; IPR046341; SET_dom_sf.
DR InterPro; IPR036987; SRA-YDG_sf.
DR InterPro; IPR003105; SRA_YDG.
DR PANTHER; PTHR45660; HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR; 1.
DR PANTHER; PTHR45660:SF13; HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR; 1.
DR Pfam; PF02182; SAD_SRA; 1.
DR Pfam; PF00856; SET; 1.
DR SMART; SM00317; SET; 1.
DR SMART; SM00466; SRA; 1.
DR SUPFAM; SSF88697; PUA domain-like; 1.
DR SUPFAM; SSF82199; SET domain; 1.
DR PROSITE; PS50280; SET; 1.
DR PROSITE; PS51015; YDG; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00358}; Reference proteome {ECO:0000313|Proteomes:UP000007264}.
FT DOMAIN 30..180
FT /note="YDG"
FT /evidence="ECO:0000259|PROSITE:PS51015"
FT DOMAIN 315..459
FT /note="SET"
FT /evidence="ECO:0000259|PROSITE:PS50280"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EIE25424.1"
SQ SEQUENCE 483 AA; 54004 MW; E5F3FC14A3EA5CEE CRC64;
GRKMSQRPDT KARKIMSDEG LCVNTKKTAG HVPGHPPSNR YFLRSEMGCL GVHFPPLTGI
DYCTSKEIPS GCPEFAISIV NSGCYQDDDD KGEQLIYTGQ GGCDLLGNKK QVSDQVMRAG
NKALVGNIEL GIPIRVVRKN KDAASEYGNI FIYDGLYDVV KYWSEKGVEG FDVFKYLMIR
RPEQAELLSK SLAFGGTSAP KNHSIDKDIS NGLERIPVSS INRGVSLPLL RYIVEYEFDE
NMPQPEPRVL PANFKNNPHD YVKELNGGSM PYSKNKNNHF IVDCARAMIF ECGPWTGCPD
GIHCGYAVSQ QGLQWRLEVF KTRFKGWGVR SWDTIPVGSY ITTFVGRVHR IEDCDGSKDD
TFYFDLGKRT DFGWDNKPIE EGHDMCVLRT SACNLDQETK YYVDGGETGG MSRYINHSCD
PNLYVQPVLC DHADVDMPKI CLFAAKNIPP FEELTYDYGP QYIRENLDGK CNCGAVGCQA
PAE
//