ID I1I053_BRADI Unreviewed; 613 AA.
AC I1I053;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 63.
DE RecName: Full=SET domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100833085 {ECO:0000313|EnsemblPlants:KQJ94707};
GN ORFNames=BRADI_3g12710v3 {ECO:0000313|EMBL:KQJ94707.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EnsemblPlants:KQJ94707};
RN [1] {ECO:0000313|EMBL:KQJ94707.1, ECO:0000313|EnsemblPlants:KQJ94707}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQJ94707.1,
RC ECO:0000313|EnsemblPlants:KQJ94707};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQJ94707.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQJ94707.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQJ94707}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQJ94707};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-ProRule:PRU00358}.
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DR EMBL; CM000882; KQJ94707.1; -; Genomic_DNA.
DR RefSeq; XP_010234208.1; XM_010235906.2.
DR AlphaFoldDB; I1I053; -.
DR STRING; 15368.I1I053; -.
DR EnsemblPlants; KQJ94707; KQJ94707; BRADI_3g12710v3.
DR GeneID; 100833085; -.
DR Gramene; KQJ94707; KQJ94707; BRADI_3g12710v3.
DR KEGG; bdi:100833085; -.
DR eggNOG; KOG1082; Eukaryota.
DR HOGENOM; CLU_004556_4_1_1; -.
DR InParanoid; I1I053; -.
DR OMA; CHCVASP; -.
DR OrthoDB; 5481936at2759; -.
DR Proteomes; UP000008810; Chromosome 3.
DR GO; GO:0005694; C:chromosome; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003690; F:double-stranded DNA binding; IBA:GO_Central.
DR GO; GO:0042054; F:histone methyltransferase activity; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 2.170.270.10; SET domain; 1.
DR Gene3D; 2.30.280.10; SRA-YDG; 1.
DR InterPro; IPR007728; Pre-SET_dom.
DR InterPro; IPR015947; PUA-like_sf.
DR InterPro; IPR001214; SET_dom.
DR InterPro; IPR046341; SET_dom_sf.
DR InterPro; IPR036987; SRA-YDG_sf.
DR InterPro; IPR003105; SRA_YDG.
DR PANTHER; PTHR45660; HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR; 1.
DR PANTHER; PTHR45660:SF87; OS08G0565700 PROTEIN; 1.
DR Pfam; PF05033; Pre-SET; 1.
DR Pfam; PF02182; SAD_SRA; 1.
DR Pfam; PF00856; SET; 1.
DR SMART; SM00468; PreSET; 1.
DR SMART; SM00317; SET; 1.
DR SMART; SM00466; SRA; 1.
DR SUPFAM; SSF88697; PUA domain-like; 1.
DR SUPFAM; SSF82199; SET domain; 1.
DR PROSITE; PS50867; PRE_SET; 1.
DR PROSITE; PS50280; SET; 1.
DR PROSITE; PS51015; YDG; 1.
PE 4: Predicted;
KW Chromosome {ECO:0000256|ARBA:ARBA00022454};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00358}; Reference proteome {ECO:0000313|Proteomes:UP000008810}.
FT DOMAIN 178..327
FT /note="YDG"
FT /evidence="ECO:0000259|PROSITE:PS51015"
FT DOMAIN 408..467
FT /note="Pre-SET"
FT /evidence="ECO:0000259|PROSITE:PS50867"
FT DOMAIN 470..610
FT /note="SET"
FT /evidence="ECO:0000259|PROSITE:PS50280"
FT REGION 1..109
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..38
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 92..109
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 613 AA; 67149 MW; BA0C11647274721B CRC64;
MAPPPLPPPH LLIPKPEPDA PLPTQPQQML PNPKAEPDAA PPADLALEHF DPHRQQQLEP
SPDPQHRLCA ANLYLPPAGK GSLPPPPPQS AIVASASSTG KKRNRQGNQM MRASTATAQD
YIYSRSQVRA ARLTFEALRV HFARHPLPDA PRNRIDLRAC NAMRVQGLSL YREPRIVGAI
PGVSVGDSFF YRAELCVVGL HRTTQSGISF VPAGLVREGH PVATSIVSSG VYHDDHDSGD
VLVYTGSGGR PRNRVEHHED QKADSGGNLA LHNSYVYGVE VRVIRCHPCQ ASPSSKVYVY
DGLYNVVSSS YGPGKSGPSV CTFKLMRIAG QDQLGSSTWC MAKDIKDKLA SQVCPPGYIS
LDLSNGKELF RVPVRNNVDN VSSPLHFEYI THPEFPLPPI LGPVRRHKGC HCLGGTCGSK
CSCARKNSGG PVYNEDGTLV RGRRVVYECG GLCDCTMSCL NRATQRGMKH QLELFRSKET
GWGVRTLDLI QPGAFVCEFS GDVVAACDAS MDQGSFIDPR RFPERWKEWG DASAVFPDQK
KAPSHPFQGP DYVLDVSQRR NFASYISHSS IPNVFVQLVI RGNENLSFPH LMVFAMDTIP
PLRELSVDYG ITQ
//
